RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 BLOC1S3Q6QNY0 202 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 GRINAQ7Z429 371 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 SLC25A43Q8WUT9 341 aaPredicted RBP18.23■□□□□ 0.51
SS18-224ENST00000584083 SLC38A5Q8WUX1 472 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 WFIKKN1Q96NZ8 548 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 RAD21L1Q9H4I0 556 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 CTPS2Q9NRF8 586 aa18.23■□□□□ 0.51
SS18-224ENST00000584083 THUMPD1Q9NXG2 353 aaKnown RBP18.23■□□□□ 0.51
SS18-224ENST00000584083 SPIN1Q9Y657 262 aaPredicted RBP18.23■□□□□ 0.51
SS18-224ENST00000584083 AP3D1O14617 1153 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 GOSR1O95249 250 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 NID1P14543 1247 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 RPS4Y1P22090 263 aaKnown RBP18.22■□□□□ 0.51
SS18-224ENST00000584083 ENPP1P22413 925 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 PLAURQ03405 335 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 SQLEQ14534 574 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 MAPK11Q15759 364 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 SYT14P1Q58G82 188 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 MRPL2Q5T653 305 aaKnown RBP18.22■□□□□ 0.51
SS18-224ENST00000584083 ANKRD34AQ69YU3 496 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 SLC43A2Q8N370 569 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 OR52P1PQ8NH57 321 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 CCDC106Q9BWC9 280 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 LIME1Q9H400 295 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 CACYBPQ9HB71 228 aaKnown RBP18.22■□□□□ 0.51
SS18-224ENST00000584083 FANCFQ9NPI8 374 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 ZNF226Q9NYT6 803 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 DCTN4Q9UJW0 460 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 EDARQ9UNE0 448 aa18.22■□□□□ 0.51
SS18-224ENST00000584083 HRNRQ86YZ3 2850 aaPredicted RBP18.21■□□□□ 0.51
SS18-224ENST00000584083 ADAM11O75078 769 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 UQCRBP14927 111 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 NCF2P19878 526 aaPredicted RBP18.21■□□□□ 0.51
SS18-224ENST00000584083 CCNA2P20248 432 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 ATP4BP51164 291 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 IRX1P78414 480 aaPredicted RBP18.21■□□□□ 0.51
SS18-224ENST00000584083 RGNQ15493 299 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 RPS26P11Q5JNZ5 115 aaPredicted RBP18.21■□□□□ 0.51
SS18-224ENST00000584083 BEND4Q6ZU67 534 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 ZNF550Q7Z398 422 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 VRK2Q86Y07 508 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 TUSC5Q8IXB3 177 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 ZC3HAV1LQ96H79 300 aaKnown RBP18.21■□□□□ 0.51
SS18-224ENST00000584083 TMEM19Q96HH6 336 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 GP6Q9HCN6 339 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 NPHS2Q9NP85 383 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 KLHL13Q9P2N7 655 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 CHRNA9Q9UGM1 479 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 ZNF232Q9UNY5 417 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 FREM1Q5H8C1 2179 aa18.21■□□□□ 0.51
SS18-224ENST00000584083 CFAP73A6NFT4 308 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 SULT2B1O00204 365 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 EDF1O60869 148 aaKnown RBP18.2■□□□□ 0.5
SS18-224ENST00000584083 YES1P07947 543 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 CCKARP32238 428 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 HTR3AP46098 478 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 DIO1P49895 249 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 CSNK2A1P68400 391 aaPredicted RBP18.2■□□□□ 0.5
SS18-224ENST00000584083 LARS2Q15031 903 aaKnown RBP18.2■□□□□ 0.5
SS18-224ENST00000584083 LIN52Q52LA3 116 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 TMPPEQ6ZT21 453 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 NUFIP2Q7Z417 695 aaKnown RBP18.2■□□□□ 0.5
SS18-224ENST00000584083 ZNF440Q8IYI8 595 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 RABEP2Q9H5N1 569 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 RLIMQ9NVW2 624 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 TMEM45AQ9NWC5 275 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 C6orf203Q9P0P8 240 aaPredicted RBP18.2■□□□□ 0.5
SS18-224ENST00000584083 KLHL9Q9P2J3 617 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 ST6GALNAC2Q9UJ37 374 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 DSPPQ9NZW4 1301 aa18.2■□□□□ 0.5
SS18-224ENST00000584083 TMED7-TICAM2A0A0A6YYA0 188 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 A0A0G2JPF8 293 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 HNRNPCL2B2RXH8 293 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 HNRNPCL3B7ZW38 293 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 HNRNPCL1O60812 293 aaKnown RBP18.19■□□□□ 0.5
SS18-224ENST00000584083 HRGP04196 525 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 FESP07332 822 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 NUDT7P0C024 238 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 HNRNPCL4P0DMR1 293 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 IST1P53990 364 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 RASGEF1BQ0VAM2 473 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 FADDQ13158 208 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 PAGE3Q5JUK9 113 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 LRIF1Q5T3J3 769 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 ZNF836Q6ZNA1 936 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 ADGRG3Q86Y34 549 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 ZHX1-C8orf76Q96EF9 292 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 DNAJA3Q96EY1 480 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 TACO1Q9BSH4 297 aaKnown RBP18.19■□□□□ 0.5
SS18-224ENST00000584083 SLC25A37Q9NYZ2 338 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 SLAMF8Q9P0V8 285 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 TRIM33Q9UPN9 1127 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 ZNF443Q9Y2A4 671 aaPredicted RBP18.19■□□□□ 0.5
SS18-224ENST00000584083 TMED7Q9Y3B3 224 aa18.19■□□□□ 0.5
SS18-224ENST00000584083 CDHR4A6H8M9 788 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 C5orf58C9J3I9 102 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 SMAD9O15198 467 aaKnown RBP18.18■□□□□ 0.5
SS18-224ENST00000584083 CYTIPO60759 359 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 GKN3PP0CG01 181 aa18.18■□□□□ 0.5
SS18-224ENST00000584083 HOXB9P17482 250 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms