RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 YIF1BQ5BJH7 314 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 AGBL4Q5VU57 503 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 OR5M10Q6IEU7 315 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 SHISA2Q6UWI4 295 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 C6orf120Q7Z4R8 191 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 CATSPERDQ86XM0 798 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 ZG16BQ96DA0 208 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 SIPA1Q96FS4 1042 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 TBX5Q99593 518 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 SSX3Q99909 188 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 ANKHQ9HCJ1 492 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 LHX9Q9NQ69 397 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 NLKQ9UBE8 527 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 CLDN16Q9Y5I7 305 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 MTCH2Q9Y6C9 303 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 ALPK2Q86TB3 2170 aa10.77□□□□□ -0.68
CDK5RAP3-231ENST00000584063 FAM172BPA6NC97 362 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C2CD4DB7Z1M9 353 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HPGDSO60760 199 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PROS1P07225 676 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 H1F0P07305 194 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OSMP13725 252 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RAB4AP20338 218 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LIMS1P48059 325 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SNRPNP63162 240 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PDE7AQ13946 482 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TIMM50Q3ZCQ8 353 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PGBD2Q6P3X8 592 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 IL20RBQ6UXL0 311 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SSX9Q7RTT3 188 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 IL17RCQ8NAC3 791 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LRRC20Q8TCA0 184 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SMAP2Q8WU79 429 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MAPKAP1Q9BPZ7 522 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TREX2Q9BQ50 279 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TTYH1Q9H313 450 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SYNPO2LQ9H987 977 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CAMK2AQ9UQM7 478 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LSM2Q9Y333 95 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PRELID3BQ9Y3B1 194 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 POMT1Q9Y6A1 747 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LOC102723532A0A0G2JNH3 316 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 A0A1W2PQU0 124 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CD8B2A6NJW9 211 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MRPS14O60783 128 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LALBAP00709 142 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CD8BP10966 210 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ACP5P13686 325 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MMP11P24347 488 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MYL9P24844 172 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 NTSR1P30989 418 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KIR2DL1P43626 348 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 AVPR1BP47901 424 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 PCBP3P57721 371 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TAS2R60P59551 318 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 UBE2G2P60604 165 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 LRRC32Q14392 662 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GPR19Q15760 415 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF630Q2M218 657 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CRB2Q5IJ48 1285 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 HIST2H2AA3Q6FI13 130 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SMRP1Q8NCR6 262 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR4F15Q8NGB8 312 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR52I1Q8NGK6 324 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 REPS1Q96D71 796 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C10orf90Q96M02 699 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 POLDIP3Q9BY77 421 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 AICDAQ9GZX7 198 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR52A5Q9H2C5 316 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 THSD1Q9NS62 852 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 STUB1Q9UNE7 303 aa10.77□□□□□ -0.69
CDK5RAP3-231ENST00000584063 B4DXG7 233 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 C4orf51C9J302 202 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TLX3O43711 291 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 DDCP20711 480 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CLDN2P57739 230 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TFF2Q03403 129 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RASGEF1BQ0VAM2 473 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SWI5Q1ZZU3 235 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ZNF791Q3KP31 576 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 GARNL3Q5VVW2 1013 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RNLSQ5VYX0 342 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KLHL24Q6TFL4 600 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 MTSS1LQ765P7 747 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KLBQ86Z14 1044 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FRMD1Q8N878 549 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 OR6T1Q8NGN1 323 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 RPLP0P6Q8NHW5 317 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 ST7LQ8TDW4 575 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TFGQ92734 400 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TM4SF18Q96CE8 201 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TMCO6Q96DC7 493 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 FBXO17Q96EF6 278 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 EFCAB11Q9BUY7 163 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 TTTY10Q9BZA0 68 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 KLHL31Q9H511 634 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 SLC25A19Q9HC21 320 aa10.76□□□□□ -0.69
CDK5RAP3-231ENST00000584063 CTSFQ9UBX1 484 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms