RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 RBBP4Q09028 425 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 SCARB2Q14108 478 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 LARS2Q15031 903 aaKnown RBP22.33■■□□□ 1.17
TSEN54-209ENST00000583454 ZNF836Q6ZNA1 936 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 GRAMD2AQ8IUY3 354 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 POU5F2Q8N7G0 328 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 OR8J3Q8NGG0 315 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 MBD3L2Q8NHZ7 208 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-209ENST00000583454 SH3GL1Q99961 368 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 SLC39A3Q9BRY0 314 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 RLIMQ9NVW2 624 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 GID8Q9NWU2 228 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 CRIM1Q9NZV1 1036 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 CLCF1Q9UBD9 225 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 ZNF443Q9Y2A4 671 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-209ENST00000583454 CHST2Q9Y4C5 530 aa22.33■■□□□ 1.17
TSEN54-209ENST00000583454 ADAMDEC1O15204 470 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 IL11P20809 199 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 BMP5P22003 454 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 SLC6A2P23975 617 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 GZMMP51124 257 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 ZNF136P52737 540 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 SESN3P58005 492 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 SERPINA11Q86U17 422 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 TMEM234Q8WY98 164 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 WNT2BQ93097 391 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 RCN3Q96D15 328 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 SPATA9Q9BWV2 254 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 LIME1Q9H400 295 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 PRDM4Q9UKN5 801 aa22.32■■□□□ 1.16
TSEN54-209ENST00000583454 FAAHO00519 579 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 SEC14L5O43304 696 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 PABPC4LP0CB38 370 aaKnown RBP22.31■■□□□ 1.16
TSEN54-209ENST00000583454 KIR2DL3P43628 341 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 ASCL1P50553 236 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 CYP51A1Q16850 503 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 CTU2Q2VPK5 515 aaKnown RBP22.31■■□□□ 1.16
TSEN54-209ENST00000583454 ZNF440Q8IYI8 595 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 LILRA2Q8N149 483 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 CLIP4Q8N3C7 705 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 C11orf65Q8NCR3 313 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 HIPK4Q8NE63 616 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 SMPDL3BQ92485 455 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 ADGRG7Q96K78 797 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 GPATCH1Q9BRR8 931 aaKnown RBP22.31■■□□□ 1.16
TSEN54-209ENST00000583454 RSPO3Q9BXY4 272 aaPredicted RBP22.31■■□□□ 1.16
TSEN54-209ENST00000583454 CXXC4Q9H2H0 198 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 ARL2BPQ9Y2Y0 163 aa22.31■■□□□ 1.16
TSEN54-209ENST00000583454 DVL2O14641 736 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 ME2P23368 584 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 UQCRC1P31930 480 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 RYKP34925 604 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 PCBP3P57721 371 aaKnown RBP22.3■■□□□ 1.16
TSEN54-209ENST00000583454 RABL3Q5HYI8 236 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 ZNF311Q5JNZ3 666 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 CHMP1BQ7LBR1 199 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 CALHM3Q86XJ0 350 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 KRT73Q86Y46 540 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 C9orf106Q8NAJ2 232 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 OR10A6Q8NH74 314 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 RNASE6Q93091 150 aaKnown RBP22.3■■□□□ 1.16
TSEN54-209ENST00000583454 CCT8L2Q96SF2 557 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 CACYBPQ9HB71 228 aaKnown RBP22.3■■□□□ 1.16
TSEN54-209ENST00000583454 RASSF1Q9NS23 344 aa22.3■■□□□ 1.16
TSEN54-209ENST00000583454 ZNF629Q9UEG4 869 aaPredicted RBP22.3■■□□□ 1.16
TSEN54-209ENST00000583454 CFAP73A6NFT4 308 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 AP3D1O14617 1153 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 SHOX2O60902 331 aaPredicted RBP22.29■■□□□ 1.16
TSEN54-209ENST00000583454 IL2RAP01589 272 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 RPS3AP61247 264 aaKnown RBP22.29■■□□□ 1.16
TSEN54-209ENST00000583454 EPS8Q12929 822 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 ESPNLQ6ZVH7 1005 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 PLEKHM3Q6ZWE6 761 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 SLC35B4Q969S0 331 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 TM9SF2Q99805 663 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 SPATA5L1Q9BVQ7 753 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 POLDIP3Q9BY77 421 aaKnown RBP22.29■■□□□ 1.16
TSEN54-209ENST00000583454 ARMC7Q9H6L4 198 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 TMEM185BQ9H7F4 350 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 ZNF175Q9Y473 711 aa22.29■■□□□ 1.16
TSEN54-209ENST00000583454 A0A0J9YW62 118 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 EIF1AYO14602 144 aaKnown RBP22.28■■□□□ 1.16
TSEN54-209ENST00000583454 RCBTB2O95199 551 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 TGM6O95932 706 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 OPN1LWP04000 364 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 SHC1P29353 583 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 PRDX6P30041 224 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 PRKAR1BP31321 381 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 ACAA2P42765 397 aaKnown RBP22.28■■□□□ 1.16
TSEN54-209ENST00000583454 IDH2P48735 452 aaKnown RBP22.28■■□□□ 1.16
TSEN54-209ENST00000583454 SELENBP1Q13228 472 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 PLXDC2Q6UX71 529 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 SLC30A8Q8IWU4 369 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 ANKS4BQ8N8V4 417 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 OR2V1Q8NHB1 315 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 ZNF563Q8TA94 476 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 NINJ1Q92982 152 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 CMTM5Q96DZ9 223 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 KLHL15Q96M94 604 aa22.28■■□□□ 1.16
TSEN54-209ENST00000583454 ZNF607Q96SK3 696 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms