RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 SERINC4A6NH21 518 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 CCT8L1PA6NM43 557 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 SULT2B1O00204 365 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 EIF4E2O60573 245 aaKnown RBP14.18□□□□□ -0.14
SREBF1-221ENST00000583080 CYP7B1O75881 506 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 C6orf47O95873 294 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 ITGA5P08648 1049 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 EFNA4P52798 201 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 SESN3P58005 492 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 RPS26P62854 115 aaKnown RBP14.18□□□□□ -0.14
SREBF1-221ENST00000583080 LSM11P83369 360 aaKnown RBP eCLIP14.18□□□□□ -0.14
SREBF1-221ENST00000583080 SLC25A3Q00325 362 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 SPDYE7PQ495Y7 208 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 SYT14P1Q58G82 188 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 ZNF544Q6NX49 715 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 RNF165Q6ZSG1 346 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 TMPPEQ6ZT21 453 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 TRMT10CQ7L0Y3 403 aaKnown RBP14.18□□□□□ -0.14
SREBF1-221ENST00000583080 R3HCC1LQ7Z5L2 792 aaKnown RBP14.18□□□□□ -0.14
SREBF1-221ENST00000583080 OR5AK3PQ8NH89 298 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 PSMA8Q8TAA3 256 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 PROX1Q92786 737 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 OR7D2Q96RA2 312 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 SERHL2Q9H4I8 314 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 EMC3Q9P0I2 261 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 NOSIPQ9Y314 301 aaKnown RBP14.18□□□□□ -0.14
SREBF1-221ENST00000583080 TMED5Q9Y3A6 229 aa14.18□□□□□ -0.14
SREBF1-221ENST00000583080 NUP214P35658 2090 aaPredicted RBP14.18□□□□□ -0.14
SREBF1-221ENST00000583080 ARFGEF3Q5TH69 2177 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 DNAJA2O60884 412 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 CSF3P09919 207 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 CPA3P15088 417 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 THBS2P35442 1172 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 MERTKQ12866 999 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 GGTLC2Q14390 218 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 PTGR1Q14914 329 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 GABRA6Q16445 453 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 CCDC153Q494R4 210 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 FAM120AOSQ5T036 256 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 C9orf135Q5VTT2 229 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 C10orf107Q8IVU9 208 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 DDIASQ8IXT1 998 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 WDR31Q8NA23 367 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 CCDC63Q8NA47 563 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 OR52E4Q8NGH9 312 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 OR5P2Q8WZ92 322 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 ST8SIA1Q92185 356 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 SDF2Q99470 211 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
SREBF1-221ENST00000583080 LAT2Q9GZY6 243 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 TAS2R16Q9NYV7 291 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 MALT1Q9UDY8 824 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 KCNS2Q9ULS6 477 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 ATP23Q9Y6H3 246 aa14.17□□□□□ -0.14
SREBF1-221ENST00000583080 VWC2LB2RUY7 222 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 ATP6V1G2-DDX39BF2Z307 99 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 PIP5K1BO14986 540 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 BCAS1O75363 584 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-221ENST00000583080 CHRNGP07510 517 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 KRT16P08779 473 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 FAM153BP0C7A2 387 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 UBTFL6P0CB48 400 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-221ENST00000583080 GZMKP49863 264 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 CSNK2A1P68400 391 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-221ENST00000583080 PCLAFQ15004 111 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 PDK3Q15120 406 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 GPR68Q15743 365 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 FAM153CQ494X1 144 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 FAM166AQ6J272 317 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 MTDHQ86UE4 582 aaKnown RBP14.16□□□□□ -0.14
SREBF1-221ENST00000583080 KRTCAP2Q8N6L1 136 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 SFXN5Q8TD22 340 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 TWIST2Q8WVJ9 160 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 C3orf49Q96BT1 292 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 MSI2Q96DH6 328 aaKnown RBP14.16□□□□□ -0.14
SREBF1-221ENST00000583080 ARL5BQ96KC2 179 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 C16orf45Q96MC5 204 aaPredicted RBP14.16□□□□□ -0.14
SREBF1-221ENST00000583080 C1orf50Q9BV19 199 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 PRR14Q9BWN1 585 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 NMUR2Q9GZQ4 415 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 EML4Q9HC35 981 aaKnown RBP14.16□□□□□ -0.14
SREBF1-221ENST00000583080 ASB6Q9NWX5 421 aa14.16□□□□□ -0.14
SREBF1-221ENST00000583080 LOC100289279A0A1B0GTE1 492 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 PDLIM1O00151 329 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 FCMRO60667 390 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 CHEK2O96017 543 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 TFPIP10646 304 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 CRHR1P34998 444 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 SOAT1P35610 550 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 ZNF141Q15928 474 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 CCDC103Q8IW40 242 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 CLEC4FQ8N1N0 589 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 DEPDC4Q8N2C3 294 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 SLC25A43Q8WUT9 341 aaPredicted RBP14.15□□□□□ -0.14
SREBF1-221ENST00000583080 ANP32BQ92688 251 aaKnown RBP14.15□□□□□ -0.14
SREBF1-221ENST00000583080 ARL8AQ96BM9 186 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 MUS81Q96NY9 551 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 SORCS2Q96PQ0 1159 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 CCDC106Q9BWC9 280 aa14.15□□□□□ -0.14
SREBF1-221ENST00000583080 TXLNGYQ9BZA5 131 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms