RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 GKN3PP0CG01 181 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 TFPIP10646 304 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 GPX2P18283 190 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CCNA2P20248 432 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 SLC6A2P23975 617 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CPOXP36551 454 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 APOBEC1P41238 236 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 EPS8Q12929 822 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 MYBPHQ13203 477 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 SNTB1Q13884 538 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 SCARB2Q14108 478 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CAPRIN1Q14444 709 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF239Q16600 458 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CYP51A1Q16850 503 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 FBXL19-AS1Q494R0 122 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF311Q5JNZ3 666 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 RNF220Q5VTB9 566 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 REEP3Q6NUK4 255 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 ACBD4Q8NC06 268 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 SLC25A43Q8WUT9 341 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 ROBO4Q8WZ75 1007 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CPNE4Q96A23 557 aaPredicted RBP11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 ANKRD27Q96NW4 1050 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CCDC106Q9BWC9 280 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 SPATA9Q9BWV2 254 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 RBM24Q9BX46 236 aaKnown RBP11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 SRXN1Q9BYN0 137 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 FAM107BQ9H098 131 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 TMEM38AQ9H6F2 299 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 COQ10BQ9H8M1 238 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 BCL2L10Q9HD36 194 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CAPN7Q9Y6W3 813 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CENPEQ02224 2701 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 CELSR2Q9HCU4 2923 aa11.29□□□□□ -0.6
SMARCE1-218ENST00000582955 LOC100653049A0A140TA62 436 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 FBP2O00757 339 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 MRASO14807 208 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 KRT34O76011 436 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 ETS2P15036 469 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 AQP1P29972 269 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 KIR2DL2P43627 348 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 HTR3AP46098 478 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 CTBP2P56545 445 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 COPZ1P61923 177 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 SELPLGQ14242 412 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 ZSWIM7Q19AV6 140 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 TRMT5Q32P41 509 aaKnown RBP11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 SYT14P1Q58G82 188 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 REP15Q6BDI9 236 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 GTF2IRD2BQ6EKJ0 949 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 FAM214BQ7L5A3 538 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF550Q7Z398 422 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 BTLAQ7Z6A9 289 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 GTF2IRD2Q86UP8 949 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 SNX32Q86XE0 403 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 KRT73Q86Y46 540 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 KIF18BQ86Y91 864 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF295-AS1Q8N0V1 137 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 CLIP4Q8N3C7 705 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 CADM2Q8N3J6 435 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 STARD4Q96DR4 205 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 DNAJA3Q96EY1 480 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 GMPPAQ96IJ6 420 aaPredicted RBP11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 ZNF559Q9BR84 538 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 SPATA5L1Q9BVQ7 753 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 SLC24A3Q9HC58 644 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 GALNT8Q9NY28 637 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 JKAMPQ9P055 326 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 ARMCX1Q9P291 453 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 CHRNA9Q9UGM1 479 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 PROCRQ9UNN8 238 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 EMC9Q9Y3B6 208 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 CACNA1DQ01668 2161 aa11.28□□□□□ -0.6
SMARCE1-218ENST00000582955 TMED7-TICAM2A0A0A6YYA0 188 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 IGHV3-15A0A0B4J1V0 119 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 BBIP1A8MTZ0 92 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 A8MXE2 369 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 FAAHO00519 579 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 DYNC1I1O14576 645 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 MSTNO14793 375 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 FRS3O43559 492 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SS18L1O75177 396 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 PRG2P13727 222 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 TACR3P29371 465 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 ADSLP30566 484 aaPredicted RBP11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SSTR2P30874 369 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 PEX19P40855 299 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SLC1A3P43003 542 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 KIR2DL3P43628 341 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 POLR2HP52434 150 aaKnown RBP11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SEC24CP53992 1094 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 GYS2P54840 703 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 TLE4Q04727 773 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 FCRLAQ7L513 359 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SPATA21Q7Z572 469 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 SERPINA11Q86U17 422 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 C11orf65Q8NCR3 313 aa11.27□□□□□ -0.61
SMARCE1-218ENST00000582955 HIPK4Q8NE63 616 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms