RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 PRSS51A0A1B0GVH4 220 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 SMPD2O60906 423 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 RPS26P62854 115 aaKnown RBP18.64■□□□□ 0.57
CCDC42-203ENST00000581598 NDUFAF6Q330K2 333 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 TMEM176BQ3YBM2 270 aaPredicted RBP18.64■□□□□ 0.57
CCDC42-203ENST00000581598 AGKQ53H12 422 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 PDZK1Q5T2W1 519 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 C6orf89Q6UWU4 347 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 TRPM8Q7Z2W7 1104 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 BIVMQ86UB2 503 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 TREML1Q86YW5 311 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 SLC43A2Q8N370 569 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 VPS37AQ8NEZ2 397 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 ABHD3Q8WU67 409 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 C18orf12Q96KH6 178 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 POLE3Q9NRF9 147 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 EXD2Q9NVH0 621 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 KCNE5Q9UJ90 142 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 NIPBLQ6KC79 2804 aaeCLIP18.64■□□□□ 0.57
CCDC42-203ENST00000581598 ROS1P08922 2347 aa18.64■□□□□ 0.57
CCDC42-203ENST00000581598 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.63■□□□□ 0.57
CCDC42-203ENST00000581598 FAM234BA2RU67 622 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 UGT2B17O75795 530 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 PRKD3O94806 890 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 UQCRC2P22695 453 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 RNF144AP50876 292 aaPredicted RBP18.63■□□□□ 0.57
CCDC42-203ENST00000581598 NR1H2P55055 460 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 RAC3P60763 192 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 PHC1P78364 1004 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 SKP2Q13309 424 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 QPRTQ15274 297 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 TMEM201Q5SNT2 666 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 BLOC1S3Q6QNY0 202 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 PRSS57Q6UWY2 283 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 FCRLAQ7L513 359 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 OR4A15Q8NGL6 344 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 TSPEARQ8WU66 669 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 ST8SIA1Q92185 356 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 ZNF524Q96C55 264 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 ZBTB18Q99592 522 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 HDHD5Q9BXW7 423 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 ACTR6Q9GZN1 396 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 OR51I1Q9H343 314 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 UBTD1Q9HAC8 227 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 SLC52A3Q9NQ40 469 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 PRR14LQ5THK1 2151 aa18.63■□□□□ 0.57
CCDC42-203ENST00000581598 CCT8L1PA6NM43 557 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 FCMRO60667 390 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 PRDX6P30041 224 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 POLR2JP52435 117 aaKnown RBP18.62■□□□□ 0.57
CCDC42-203ENST00000581598 KRT72Q14CN4 511 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 GPR68Q15743 365 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 C3orf33Q6P1S2 294 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 TFAP2EQ6VUC0 442 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 C16orf62Q7Z3J2 963 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 GABRG1Q8N1C3 465 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 CLEC4FQ8N1N0 589 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 TMCO5AQ8N6Q1 288 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 STEAP2Q8NFT2 490 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 CCL19Q99731 98 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 SAP130Q9H0E3 1048 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 GSX1Q9H4S2 264 aaPredicted RBP18.62■□□□□ 0.57
CCDC42-203ENST00000581598 BCO1Q9HAY6 547 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 CCDC167Q9P0B6 97 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 MKLN1Q9UL63 735 aa18.62■□□□□ 0.57
CCDC42-203ENST00000581598 VPS13CQ709C8 3753 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 C9JVG2 144 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 KIAA0513O60268 411 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 TMCC2O75069 709 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 GCM2O75603 506 aaPredicted RBP18.61■□□□□ 0.57
CCDC42-203ENST00000581598 YES1P07947 543 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 MAPRE2Q15555 327 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 SAXO2Q658L1 398 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 EIF3MQ7L2H7 374 aaKnown RBP18.61■□□□□ 0.57
CCDC42-203ENST00000581598 P3H2Q8IVL5 708 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 TUSC5Q8IXB3 177 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 FAM71CQ8NEG0 241 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 IGFBPL1Q8WX77 278 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 TMEM234Q8WY98 164 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 NEURL3Q96EH8 262 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 TMEM204Q9BSN7 226 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 THUMPD3Q9BV44 507 aaKnown RBP18.61■□□□□ 0.57
CCDC42-203ENST00000581598 C12orf49Q9H741 205 aa18.61■□□□□ 0.57
CCDC42-203ENST00000581598 CENPVL1A0A0U1RR11 272 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 CSTAP01040 98 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 IL6P05231 212 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 HOXB4P17483 251 aaPredicted RBP18.6■□□□□ 0.57
CCDC42-203ENST00000581598 PGCP20142 388 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 SLC7A1P30825 629 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 CCR4P51679 360 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 FAM174BQ3ZCQ3 159 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 TIGD2Q4W5G0 525 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 SPANXN4Q5MJ08 99 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 Q5PR19 223 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 ATAD3BQ5T9A4 648 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 NUFIP2Q7Z417 695 aaKnown RBP18.6■□□□□ 0.57
CCDC42-203ENST00000581598 ANKRD46Q86W74 232 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 SPDL1Q96EA4 605 aa18.6■□□□□ 0.57
CCDC42-203ENST00000581598 USB1Q9BQ65 265 aaKnown RBP18.6■□□□□ 0.57
CCDC42-203ENST00000581598 ACER3Q9NUN7 267 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms