RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 AGR3Q8TD06 166 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 SLC25A43Q8WUT9 341 aaPredicted RBP9.36□□□□□ -0.91
RFFL-209ENST00000581265 OIT3Q8WWZ8 545 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 TMEM234Q8WY98 164 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.36□□□□□ -0.91
RFFL-209ENST00000581265 ZNF300Q96RE9 604 aaPredicted RBP9.36□□□□□ -0.91
RFFL-209ENST00000581265 C1orf50Q9BV19 199 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 MECRQ9BV79 373 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 QRSL1Q9H0R6 528 aaKnown RBP9.36□□□□□ -0.91
RFFL-209ENST00000581265 SERHL2Q9H4I8 314 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 ALG2Q9H553 416 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 ACER3Q9NUN7 267 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 NPAP1Q9NZP6 1156 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 SLC17A7Q9P2U7 560 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 ZDHHC2Q9UIJ5 367 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 GDF2Q9UK05 429 aaPredicted RBP9.36□□□□□ -0.91
RFFL-209ENST00000581265 B3GALT5Q9Y2C3 310 aa9.36□□□□□ -0.91
RFFL-209ENST00000581265 TLDC2A0PJX2 215 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 ABCD4O14678 606 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 CSTAP01040 98 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 G6PDP11413 515 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 CR1P17927 2039 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 PGCP20142 388 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 FKBP2P26885 142 aaKnown RBP9.35□□□□□ -0.91
RFFL-209ENST00000581265 APOBEC1P41238 236 aaKnown RBP9.35□□□□□ -0.91
RFFL-209ENST00000581265 CCR4P51679 360 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 RPS26P62854 115 aaKnown RBP9.35□□□□□ -0.91
RFFL-209ENST00000581265 EMX2Q04743 252 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 MERTKQ12866 999 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 MAD2L1Q13257 205 aaPredicted RBP9.35□□□□□ -0.91
RFFL-209ENST00000581265 STK11Q15831 433 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 NRF1Q16656 503 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 SMU1Q2TAY7 513 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 SYT14P1Q58G82 188 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 AGAP6Q5VW22 663 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 FBXW9Q5XUX1 488 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 ZCCHC23Q6ZST2 131 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 EIF3MQ7L2H7 374 aaKnown RBP9.35□□□□□ -0.91
RFFL-209ENST00000581265 RIBC1Q8N443 379 aaPredicted RBP9.35□□□□□ -0.91
RFFL-209ENST00000581265 TMCO5AQ8N6Q1 288 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 OR10H5Q8NGA6 315 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 MIPOL1Q8TD10 442 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 TCP10LQ8TDR4 215 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 TUBGCP3Q96CW5 907 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 HS6ST2Q96MM7 605 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 MUS81Q96NY9 551 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 ZNF350Q9GZX5 532 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 EXD2Q9NVH0 621 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 ASIC5Q9NY37 505 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 EMC3Q9P0I2 261 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 MKLN1Q9UL63 735 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 MGAT4BQ9UQ53 548 aa9.35□□□□□ -0.91
RFFL-209ENST00000581265 CENPVL1A0A0U1RR11 272 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 ZNF716A6NP11 495 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 E7EQL1 145 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 RNASET2O00584 256 aaKnown RBP9.34□□□□□ -0.91
RFFL-209ENST00000581265 GPR171O14626 319 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 DNPH1O43598 174 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 CYP7B1O75881 506 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 AGR2O95994 175 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 UBTFL6P0CB48 400 aaPredicted RBP9.34□□□□□ -0.91
RFFL-209ENST00000581265 PTAFRP25105 342 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 TTKP33981 857 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 NTF4P34130 210 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 PGM1P36871 562 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 CLK1P49759 484 aaKnown RBP9.34□□□□□ -0.91
RFFL-209ENST00000581265 MAPK14Q16539 360 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 PGS1Q32NB8 556 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 ABLIM2Q6H8Q1 611 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 TMEM108Q6UXF1 575 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.34□□□□□ -0.91
RFFL-209ENST00000581265 CLEC4FQ8N1N0 589 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 FAM71CQ8NEG0 241 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 OR8J2Q8NGG1 315 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 DHRS9Q9BPW9 319 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 RHNO1Q9BSD3 238 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 CCDC106Q9BWC9 280 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 SAP130Q9H0E3 1048 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 POLE3Q9NRF9 147 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 LGALS13Q9UHV8 139 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 PCDHGB4Q9UN71 923 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 NOSIPQ9Y314 301 aaKnown RBP9.34□□□□□ -0.91
RFFL-209ENST00000581265 SLC25A15Q9Y619 301 aa9.34□□□□□ -0.91
RFFL-209ENST00000581265 SPIN1Q9Y657 262 aaPredicted RBP9.34□□□□□ -0.91
RFFL-209ENST00000581265 ANK3Q12955 4377 aaKnown RBP9.34□□□□□ -0.91
RFFL-209ENST00000581265 A0A096LNT2 108 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 RNF103-CHMP3A0A140T963 221 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 PRSS51A0A1B0GVH4 220 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 CIB4A0PJX0 185 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 ELOA3DA6NLF2 546 aaPredicted RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 A8MV72 311 aaPredicted RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 ANKRD28O15084 1053 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 SSX4O60224 188 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 KIAA0513O60268 411 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 GPRIN2O60269 458 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 SCN2BO60939 215 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 SPAG7O75391 227 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 SKAP2O75563 359 aaPredicted RBP9.33□□□□□ -0.92
RFFL-209ENST00000581265 PMS2P2O95744 297 aa9.33□□□□□ -0.92
RFFL-209ENST00000581265 BPGMP07738 259 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms