RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SEMG1P04279 462 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 MAGEA2P43356 314 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 ARHGDIAP52565 204 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 RAC1P63000 192 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 PLAURQ03405 335 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 RBPJQ06330 500 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 SELENBP1Q13228 472 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 PIN1Q13526 163 aaPredicted RBP12.93□□□□□ -0.34
SKA2-205ENST00000580541 CCNIQ14094 377 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 TRAM2Q15035 370 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 TOMM34Q15785 309 aaPredicted RBP12.93□□□□□ -0.34
SKA2-205ENST00000580541 BCL2A1Q16548 175 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 TMEM44Q2T9K0 475 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 CMPK2Q5EBM0 449 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 NHSL2Q5HYW2 709 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 COLEC12Q5KU26 742 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 RNFT1Q5M7Z0 435 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 WIPI1Q5MNZ9 446 aaPredicted RBP12.93□□□□□ -0.34
SKA2-205ENST00000580541 PDSS1Q5T2R2 415 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 C3orf33Q6P1S2 294 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 TRILQ7L0X0 811 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 COMTD1Q86VU5 262 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 RBM45Q8IUH3 476 aaKnown RBP12.93□□□□□ -0.34
SKA2-205ENST00000580541 LACC1Q8IV20 430 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 FAM86B1Q8N7N1 296 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 OR4D11Q8NGI4 311 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 ABTB1Q969K4 478 aaPredicted RBP12.93□□□□□ -0.34
SKA2-205ENST00000580541 SNRNP40Q96DI7 357 aaKnown RBP12.93□□□□□ -0.34
SKA2-205ENST00000580541 SLC41A3Q96GZ6 507 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 GPR137Q96N19 417 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 EPYCQ99645 322 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 KRCC1Q9NPI7 259 aaPredicted RBP12.93□□□□□ -0.34
SKA2-205ENST00000580541 CHRNA9Q9UGM1 479 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 TMCC3Q9ULS5 477 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 DNAJC13O75165 2243 aa12.93□□□□□ -0.34
SKA2-205ENST00000580541 A0A087WUJ7 227 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 TMED7-TICAM2A0A0A6YYA0 188 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 OR2M5A3KFT3 312 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 AQP7O14520 342 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 TPST2O60704 377 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 ADAM11O75078 769 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 DEAF1O75398 565 aaPredicted RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 NTN1O95631 604 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 CST1P01037 141 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 H1F0P07305 194 aaKnown RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 FASP25445 335 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 HTR2AP28223 471 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 RBM34P42696 430 aaKnown RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 CDH12P55289 794 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 VLDLRP98155 873 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 FOXF1Q12946 379 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 NPTX1Q15818 432 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 TTC33Q6PID6 262 aaPredicted RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 CHMP1BQ7LBR1 199 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 SIAH3Q8IW03 269 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 PM20D2Q8IYS1 436 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 CDK20Q8IZL9 346 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 RNF113BQ8IZP6 322 aaKnown RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 OFCC1Q8IZS5 231 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 LILRA2Q8N149 483 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 LINC00471Q8N535 108 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 STK35Q8TDR2 534 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 PHF10Q8WUB8 498 aaKnown RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 C3orf49Q96BT1 292 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 WFDC6Q9BQY6 131 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 BDH2Q9BUT1 245 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 KLHL4Q9C0H6 718 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 REEP1Q9H902 201 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 NMNAT1Q9HAN9 279 aaPredicted RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 TIGARQ9NQ88 270 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 CTPS2Q9NRF8 586 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 PAQR5Q9NXK6 330 aaPredicted RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 OSGIN1Q9UJX0 560 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 ACAD8Q9UKU7 415 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 SLC7A7Q9UM01 511 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 A4GNTQ9UNA3 340 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 TMED7Q9Y3B3 224 aa12.92□□□□□ -0.34
SKA2-205ENST00000580541 TLN1Q9Y490 2541 aaKnown RBP12.92□□□□□ -0.34
SKA2-205ENST00000580541 EPG5Q9HCE0 2579 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 A0A1W2PRQ8 180 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 A8MVM7 634 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 B4DXG7 233 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 ANKRD65E5RJM6 399 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 BCKDKO14874 412 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 OR2T1O43869 369 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 GADD45GO95257 159 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 EDN3P14138 238 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 POU3F2P20265 443 aaPredicted RBP12.91□□□□□ -0.34
SKA2-205ENST00000580541 TCEA1P23193 301 aaKnown RBP12.91□□□□□ -0.34
SKA2-205ENST00000580541 IFNGR2P38484 337 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 YAP1P46937 504 aaKnown RBP12.91□□□□□ -0.34
SKA2-205ENST00000580541 GFRA1P56159 465 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 RPS3AP61247 264 aaKnown RBP12.91□□□□□ -0.34
SKA2-205ENST00000580541 SPIBQ01892 262 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 DGCR6Q14129 220 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 ZNF324BQ6AW86 544 aaPredicted RBP12.91□□□□□ -0.34
SKA2-205ENST00000580541 OR2T5Q6IEZ7 315 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 POMZP3Q6PJE2 187 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 GDF7Q7Z4P5 450 aa12.91□□□□□ -0.34
SKA2-205ENST00000580541 ATG4DQ86TL0 474 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms