RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 BTBD10Q9BSF8 475 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 TRIM2Q9C040 744 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 PCDHAC1Q9H158 963 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 CTPS2Q9NRF8 586 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 TESQ9UGI8 421 aaKnown RBP20.47■□□□□ 0.87
NDEL1-207ENST00000580012 CAMK2AQ9UQM7 478 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 FAM215AQ9Y5M1 114 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 RELNP78509 3460 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 FREM3P0C091 2139 aa20.47■□□□□ 0.87
NDEL1-207ENST00000580012 UBR5O95071 2799 aaPredicted RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 HEATR5AQ86XA9 2040 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 H0YC42 278 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 M0R3H8 397 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 TCN1P20061 433 aaPredicted RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 FKBP2P26885 142 aaKnown RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 SHC1P29353 583 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 MSX2P35548 267 aaPredicted RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 POLR2HP52434 150 aaKnown RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 TPD52P55327 224 aaPredicted RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 SRSF1Q07955 248 aaKnown RBP eCLIP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 SF3B4Q15427 424 aaKnown RBP eCLIP20.46■□□□□ 0.873e-11■■■■□ 20.8
NDEL1-207ENST00000580012 PGM2L1Q6PCE3 622 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 RBM45Q8IUH3 476 aaKnown RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 MEIOBQ8N635 442 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 PROX1Q92786 737 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 C3orf49Q96BT1 292 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 TUBA1CQ9BQE3 449 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 PRR14Q9BWN1 585 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 CALHM2Q9HA72 323 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 SERINC1Q9NRX5 453 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 DCAF13Q9NV06 445 aaKnown RBP20.46■□□□□ 0.87
NDEL1-207ENST00000580012 FLNCQ14315 2725 aa20.46■□□□□ 0.87
NDEL1-207ENST00000580012 GTF3C1Q12789 2109 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 A0A0J9YW62 118 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 GYG2O15488 501 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 LRRTM2O43300 516 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 SERPINA1P01009 418 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 SRYQ05066 204 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 BNIP2Q12982 314 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 ACSF3Q4G176 576 aaPredicted RBP20.45■□□□□ 0.86
NDEL1-207ENST00000580012 DNAL1Q4LDG9 190 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 C1orf185Q5T7R7 199 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 ESPNLQ6ZVH7 1005 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 ATG4DQ86TL0 474 aaPredicted RBP20.45■□□□□ 0.86
NDEL1-207ENST00000580012 CADM2Q8N3J6 435 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 PHF10Q8WUB8 498 aaKnown RBP20.45■□□□□ 0.86
NDEL1-207ENST00000580012 C12orf10Q9HB07 376 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 ADPRHL2Q9NX46 363 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 ALKBH4Q9NXW9 302 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.45■□□□□ 0.86
NDEL1-207ENST00000580012 CHRNA9Q9UGM1 479 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 MAGEL2Q9UJ55 1249 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 SLC5A6Q9Y289 635 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 SH3GLB1Q9Y371 365 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 SNX13Q9Y5W8 968 aa20.45■□□□□ 0.86
NDEL1-207ENST00000580012 TMED7-TICAM2A0A0A6YYA0 188 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 A0A1B0GWA3 101 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 CD8B2A6NJW9 211 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 GJE1A6NN92 205 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 CCL21O00585 134 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 ZNF208O43345 1280 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 OPN1LWP04000 364 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 ME2P23368 584 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 CLK1P49759 484 aaKnown RBP20.44■□□□□ 0.86
NDEL1-207ENST00000580012 OR1Q1Q15612 314 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 TMEM176BQ3YBM2 270 aaPredicted RBP20.44■□□□□ 0.86
NDEL1-207ENST00000580012 NSUN5P2Q63ZY6 315 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 C3P1Q6ZMU1 363 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 SEM1Q6ZVN7 128 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 CARM1Q86X55 608 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 EID3Q8N140 333 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 RPRMLQ8N4K4 120 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 MARVELD2Q8N4S9 558 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 OR10Q1Q8NGQ4 319 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 SLC25A43Q8WUT9 341 aaPredicted RBP20.44■□□□□ 0.86
NDEL1-207ENST00000580012 LZICQ8WZA0 190 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 FAM162AQ96A26 154 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 KLHL15Q96M94 604 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 MCHR1Q99705 422 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 TTYH2Q9BSA4 534 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 THTPAQ9BU02 230 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 TMEM185BQ9H7F4 350 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 ERRFI1Q9UJM3 462 aaPredicted RBP20.44■□□□□ 0.86
NDEL1-207ENST00000580012 SLC9A8Q9Y2E8 581 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 TMED7Q9Y3B3 224 aa20.44■□□□□ 0.86
NDEL1-207ENST00000580012 H0Y3Z8 333 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 ARPC2O15144 300 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 SEMA7AO75326 666 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 GMNNO75496 209 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 GLI4P10075 376 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 TRIM25Q14258 630 aaKnown RBP20.43■□□□□ 0.86
NDEL1-207ENST00000580012 C3orf33Q6P1S2 294 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 VTCN1Q7Z7D3 282 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 RANBP3LQ86VV4 465 aaPredicted RBP20.43■□□□□ 0.86
NDEL1-207ENST00000580012 TSPYL5Q86VY4 417 aaPredicted RBP20.43■□□□□ 0.86
NDEL1-207ENST00000580012 UBQLNLQ8IYU4 475 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 OR2V1Q8NHB1 315 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 DNAJA4Q8WW22 397 aaPredicted RBP20.43■□□□□ 0.86
NDEL1-207ENST00000580012 SMPDL3BQ92485 455 aa20.43■□□□□ 0.86
NDEL1-207ENST00000580012 TMEM27Q9HBJ8 222 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms