RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 CCNB2O95067 398 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 RASAL1O95294 804 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 PDGFAP04085 211 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 ZNF26P17031 533 aaPredicted RBP14.64□□□□□ -0.07
SS18-211ENST00000578954 ADH6P28332 368 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 TACR3P29371 465 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 SRD5A2P31213 254 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 CD97P48960 835 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 ZNF41P51814 821 aaPredicted RBP14.64□□□□□ -0.07
SS18-211ENST00000578954 POLR2HP52434 150 aaKnown RBP14.64□□□□□ -0.07
SS18-211ENST00000578954 GPR85P60893 370 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 CXADRP78310 365 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 PPP2R2BQ00005 443 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 TMEM44Q2T9K0 475 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 GLYR1Q49A26 553 aaPredicted RBP14.64□□□□□ -0.07
SS18-211ENST00000578954 PPP4R4Q6NUP7 873 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 FAHD1Q6P587 224 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 TBPL2Q6SJ96 375 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 RNF113BQ8IZP6 322 aaKnown RBP14.64□□□□□ -0.07
SS18-211ENST00000578954 HS3ST5Q8IZT8 346 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 ZADH2Q8N4Q0 377 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 OR10G2Q8NGC3 310 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 ZBTB8AQ96BR9 441 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 GNRHR2Q96P88 292 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 TMEM43Q9BTV4 400 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 SLC19A3Q9BZV2 496 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 OR2B2Q9GZK3 357 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 SELENONQ9NZV5 590 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 PDP1Q9P0J1 537 aaPredicted RBP14.64□□□□□ -0.07
SS18-211ENST00000578954 TMCC3Q9ULS5 477 aa14.64□□□□□ -0.07
SS18-211ENST00000578954 MAGED1Q9Y5V3 778 aaPredicted RBP14.64□□□□□ -0.07
SS18-211ENST00000578954 PDLIM1O00151 329 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 SOCS2O14508 198 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 GMFGO60234 142 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 HPRP00739 348 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 IGF2P01344 180 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 CBLP22681 906 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 DPP4P27487 766 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 VHLP40337 213 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 EIF1P41567 113 aaKnown RBP14.63□□□□□ -0.07
SS18-211ENST00000578954 MEOX1P50221 254 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 MAP2K6P52564 334 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 UGT2B15P54855 530 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 FOXF1Q12946 379 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 KCNAB2Q13303 367 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 DAG1Q14118 895 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 LAPTM4AQ15012 233 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 Q6ZS92 163 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 ZBTB49Q6ZSB9 765 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 MBOAT2Q6ZWT7 520 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 STK32CQ86UX6 486 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 GTPBP8Q8N3Z3 284 aaPredicted RBP14.63□□□□□ -0.07
SS18-211ENST00000578954 CBR4Q8N4T8 237 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 OR4K5Q8NGD3 323 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 POC1BQ8TC44 478 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 TMEM255BQ8WV15 326 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 TMEM239Q8WW34 195 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 SDCCAG3Q96C92 435 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 SLC29A1Q99808 456 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 VCX3BQ9H321 246 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 ZNF703Q9H7S9 590 aaPredicted RBP14.63□□□□□ -0.07
SS18-211ENST00000578954 COQ10BQ9H8M1 238 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 KLHL1Q9NR64 748 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 QPCTLQ9NXS2 382 aa14.63□□□□□ -0.07
SS18-211ENST00000578954 LOC400499M0QZD8 3231 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 CFAP47Q6ZTR5 3102 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 IGKV1D-42A0A075B6H8 117 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 HTR3EA5X5Y0 456 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 FAM47E-STBD1D6RA91 191 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 EI24O14681 340 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 ZIC3O60481 467 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 WISP1O95388 367 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 ALPLP05186 524 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 ANXA8P13928 327 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 ZNF17P17021 662 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 APOBEC1P41238 236 aaKnown RBP14.62□□□□□ -0.07
SS18-211ENST00000578954 ALDH3A2P51648 485 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 CTBP2P56545 445 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 LSM11P83369 360 aaKnown RBP eCLIP14.62□□□□□ -0.07
SS18-211ENST00000578954 C1orf94Q6P1W5 598 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 PGBD2Q6P3X8 592 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 ADGRG3Q86Y34 549 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 OR9Q2Q8NGE9 314 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 EXTL1Q92935 676 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 JSRP1Q96MG2 331 aaPredicted RBP14.62□□□□□ -0.07
SS18-211ENST00000578954 NPAS1Q99742 590 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 RBM4BQ9BQ04 359 aaKnown RBP14.62□□□□□ -0.07
SS18-211ENST00000578954 RBM4Q9BWF3 364 aaKnown RBP14.62□□□□□ -0.07
SS18-211ENST00000578954 DGCR6LQ9BY27 220 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 TTTY12Q9BZ98 90 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 KLHL4Q9C0H6 718 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 PRORYQ9H606 182 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 TUBD1Q9UJT1 453 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 MGAT4BQ9UQ53 548 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 VDAC3Q9Y277 283 aa14.62□□□□□ -0.07
SS18-211ENST00000578954 TMED7-TICAM2A0A0A6YYA0 188 aa14.61□□□□□ -0.07
SS18-211ENST00000578954 ELOA3DA6NLF2 546 aaPredicted RBP14.61□□□□□ -0.07
SS18-211ENST00000578954 H0YJX3 145 aa14.61□□□□□ -0.07
SS18-211ENST00000578954 ZNF208O43345 1280 aa14.61□□□□□ -0.07
SS18-211ENST00000578954 KLF4O43474 513 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms