RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 ZNF614Q8N883 585 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 FADS6Q8N9I5 356 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 PSD4Q8NDX1 1056 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 MDS2Q8NDY4 140 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 TM9SF4Q92544 642 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 TMEM41AQ96HV5 264 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 ZNF559Q9BR84 538 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 OSBPL11Q9BXB4 747 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 TRIM2Q9C040 744 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 SACM1LQ9NTJ5 587 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 C6orf203Q9P0P8 240 aaPredicted RBP7.29□□□□□ -1.24
COPS3-215ENST00000578317 DNAJB9Q9UBS3 223 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 TESQ9UGI8 421 aaKnown RBP7.29□□□□□ -1.24
COPS3-215ENST00000578317 CARD8Q9Y2G2 431 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 FAM32AQ9Y421 112 aaKnown RBP7.29□□□□□ -1.24
COPS3-215ENST00000578317 WIF1Q9Y5W5 379 aa7.29□□□□□ -1.24
COPS3-215ENST00000578317 DSPP15924 2871 aaKnown RBP7.29□□□□□ -1.24
COPS3-215ENST00000578317 A0A1W2PRQ8 180 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 MKRN2OSH3BPM6 223 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 M0R3H8 397 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 AP3D1O14617 1153 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 FFAR1O14842 300 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 CLOCKO15516 846 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 HCRTR2O43614 444 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 TRIM3O75382 744 aaPredicted RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 OR5F1O95221 314 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 LDLRP01130 860 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 THBDP07204 575 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 SP1P08047 785 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 LINGO3P0C6S8 592 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 UBTFL6P0CB48 400 aaPredicted RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 UQCRBP14927 111 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 TNFRSF1BP20333 461 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ELAVL4P26378 380 aaKnown RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 IFNA8P32881 189 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 RGS8P57771 180 aaPredicted RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 SMIM11AP58511 58 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ZNF117Q03924 483 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 FOXO1Q12778 655 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 EPS8Q12929 822 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 DGCR6Q14129 220 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ATP6AP1Q15904 470 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 TBR1Q16650 682 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 TIGD3Q6B0B8 471 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 OR2T5Q6IEZ7 315 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ZNF613Q6PF04 617 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 CBLN3Q6UW01 205 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ZNF605Q86T29 641 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 RANBP3LQ86VV4 465 aaPredicted RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 CYP4Z1Q86W10 505 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 PLCZ1Q86YW0 608 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 LILRA2Q8N149 483 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 PQLC1Q8N2U9 271 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 WDSUB1Q8N9V3 476 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 PIK3C3Q8NEB9 887 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 OR2T29Q8NH02 315 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 B4GALNT2Q8NHY0 566 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ZCCHC14Q8WYQ9 949 aaKnown RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 SCMH1Q96GD3 660 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 CENPNQ96H22 339 aaPredicted RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 SIGLEC12Q96PQ1 595 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 PIP5K1AQ99755 562 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 BDH2Q9BUT1 245 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ANKRD19PQ9H560 264 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 NMNAT1Q9HAN9 279 aaPredicted RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 RNPEPL1Q9HAU8 725 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 C12orf10Q9HB07 376 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 NTN4Q9HB63 628 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 GALNT9Q9HCQ5 603 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 AGPAT4Q9NRZ5 378 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 ANKRD10Q9NXR5 420 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 PLA2G3Q9NZ20 509 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 KLRF1Q9NZS2 232 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 A4GNTQ9UNA3 340 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 MRPS18CQ9Y3D5 142 aaKnown RBP7.28□□□□□ -1.24
COPS3-215ENST00000578317 V9GYQ6 96 aa7.28□□□□□ -1.24
COPS3-215ENST00000578317 A0A087WZY1 265 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 ANKUB1A6NFN9 424 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 ADAMDEC1O15204 470 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 FRS3O43559 492 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 NME2P1O60361 137 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 TIPRLO75663 272 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 SLC25A12O75746 678 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 CBR3O75828 277 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 CST1P01037 141 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 GKN3PP0CG01 181 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 PRG2P13727 222 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 ANPEPP15144 967 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 PGCP20142 388 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 SLC1A3P43003 542 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 MAP2K6P52564 334 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 COPZ1P61923 177 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 ARG2P78540 354 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 ST3GAL3Q11203 375 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 PIN1Q13526 163 aaPredicted RBP7.27□□□□□ -1.25
COPS3-215ENST00000578317 RAPSNQ13702 412 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 CBFBQ13951 182 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 OR1Q1Q15612 314 aa7.27□□□□□ -1.25
COPS3-215ENST00000578317 HYAL4Q2M3T9 481 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms