RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 BCHEP06276 602 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 NUDT7P0C024 238 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 EPXP11678 715 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 RYKP34925 604 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 HTR3AP46098 478 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 CLK1P49759 484 aaKnown RBP12.49□□□□□ -0.41
GGA3-203ENST00000577435 MAP2K6P52564 334 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 GUCY1A3Q02108 690 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 EPS8Q12929 822 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 MYBPHQ13203 477 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 LARS2Q15031 903 aaKnown RBP12.49□□□□□ -0.41
GGA3-203ENST00000577435 ZNF239Q16600 458 aaKnown RBP12.49□□□□□ -0.41
GGA3-203ENST00000577435 LIN52Q52LA3 116 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 RUNDC3AQ59EK9 446 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 ZNF474Q6S9Z5 364 aaPredicted RBP12.49□□□□□ -0.41
GGA3-203ENST00000577435 ADGRG3Q86Y34 549 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 OR6K3Q8NGY3 331 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 ZNF563Q8TA94 476 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 TMEM120AQ9BXJ8 343 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 SRXN1Q9BYN0 137 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 FGFR1OP2Q9NVK5 253 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 GALNT8Q9NY28 637 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 ELOVL5Q9NYP7 299 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 CRIM1Q9NZV1 1036 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 IFT52Q9Y366 437 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 EMC9Q9Y3B6 208 aa12.49□□□□□ -0.41
GGA3-203ENST00000577435 CSMD1Q96PZ7 3565 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 CFAP73A6NFT4 308 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 EVPLLA8MZ36 301 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 PGM3O95394 542 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ARAFP10398 606 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ETS2P15036 469 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 SLC7A1P30825 629 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 CD79BP40259 229 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 MDH1P40925 334 aaKnown RBP12.48□□□□□ -0.41
GGA3-203ENST00000577435 SLC1A3P43003 542 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 CPA2P48052 419 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 IDH2P48735 452 aaKnown RBP12.48□□□□□ -0.41
GGA3-203ENST00000577435 ARFIP2P53365 341 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 SNTB1Q13884 538 aaKnown RBP12.48□□□□□ -0.41
GGA3-203ENST00000577435 RNPS1Q15287 305 aaKnown RBP12.48□□□□□ -0.41
GGA3-203ENST00000577435 RNF220Q5VTB9 566 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 CGB2Q6NT52 195 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ZNF836Q6ZNA1 936 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 TMPPEQ6ZT21 453 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 VRK2Q86Y07 508 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 SLC43A2Q8N370 569 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ATP6V1C2Q8NEY4 427 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 BBS10Q8TAM1 723 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ROBO4Q8WZ75 1007 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 MAL2Q969L2 176 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 SLC35B4Q969S0 331 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 REXO5Q96IC2 774 aaKnown RBP12.48□□□□□ -0.41
GGA3-203ENST00000577435 DACH2Q96NX9 599 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 SLC39A3Q9BRY0 314 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 SPATA9Q9BWV2 254 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ADAM19Q9H013 955 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 TMEM38AQ9H6F2 299 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ARMC7Q9H6L4 198 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 CTPS2Q9NRF8 586 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 CHRNA9Q9UGM1 479 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 PROCRQ9UNN8 238 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 ZNF443Q9Y2A4 671 aaPredicted RBP12.48□□□□□ -0.41
GGA3-203ENST00000577435 CHST2Q9Y4C5 530 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 SPIN1Q9Y657 262 aaPredicted RBP12.48□□□□□ -0.41
GGA3-203ENST00000577435 CSMD2Q7Z408 3487 aa12.48□□□□□ -0.41
GGA3-203ENST00000577435 A0A1W2PNR3 127 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 ANGPT2O15123 496 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 ZNF208O43345 1280 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 CTAG2O75638 210 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 SMNDC1O75940 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
GGA3-203ENST00000577435 PRKD3O94806 890 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 GOSR1O95249 250 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 PLGP00747 810 aaPredicted RBP12.47□□□□□ -0.41
GGA3-203ENST00000577435 VIMP08670 466 aaKnown RBP12.47□□□□□ -0.41
GGA3-203ENST00000577435 UQCRBP14927 111 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 ACAA2P42765 397 aaKnown RBP12.47□□□□□ -0.41
GGA3-203ENST00000577435 CTBP2P56545 445 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 SIRPAP78324 504 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 SYT14P1Q58G82 188 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 RPS26P11Q5JNZ5 115 aaPredicted RBP12.47□□□□□ -0.41
GGA3-203ENST00000577435 GCNT6Q5T4J0 391 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 FCRLAQ7L513 359 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 ZNF550Q7Z398 422 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 RETREG3Q86VR2 466 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 ZZZ3Q8IYH5 903 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 C10orf111Q8N326 155 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 CLIP4Q8N3C7 705 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 ZNF610Q8N9Z0 462 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 ANKRD27Q96NW4 1050 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 OPN3Q9H1Y3 402 aaPredicted RBP12.47□□□□□ -0.41
GGA3-203ENST00000577435 IKZF5Q9H5V7 419 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 RLIMQ9NVW2 624 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 OSGIN1Q9UJX0 560 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 TRAPPC4Q9Y296 219 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
GGA3-203ENST00000577435 PRR14LQ5THK1 2151 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms