RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	PPP4R1L	Q9P1A2	415 aa		13.01	□□□□□ -0.33
ABR-223	ENST00000573895		Q9UFV3	132 aa		13.01	□□□□□ -0.33
ABR-223	ENST00000573895	FBXL2	Q9UKC9	423 aa		13.01	□□□□□ -0.33
ABR-223	ENST00000573895	PRDM4	Q9UKN5	801 aa		13.01	□□□□□ -0.33
ABR-223	ENST00000573895	AP4S1	Q9Y587	144 aa		13.01	□□□□□ -0.33
ABR-223	ENST00000573895	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.01	□□□□□ -0.33
ABR-223	ENST00000573895	MYO9A	B2RTY4	2548 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	MED12L	Q86YW9	2145 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	C19orf84	I3L1E1	186 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	LINC01387	J3KSC0	135 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	SYT5	O00445	386 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	MGRN1	O60291	552 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	ZIC3	O60481	467 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	UGT2B17	O75795	530 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	TOX	O94900	526 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	UTS2	O95399	124 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	RAP2A	P10114	183 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	HPGD	P15428	266 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	DPP4	P27487	766 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	ADH7	P40394	386 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	RFX3	P48380	749 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	C17orf67	Q0P5P2	114 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	BCL2A1	Q16548	175 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	SLC25A35	Q3KQZ1	300 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	GLYR1	Q49A26	553 aa	Predicted RBP	13	□□□□□ -0.33
ABR-223	ENST00000573895	LIN52	Q52LA3	116 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	IFI44L	Q53G44	452 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	KLHL26	Q53HC5	615 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	SEM1	Q6ZVN7	128 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	ADGRG5	Q8IZF4	528 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	OR4K17	Q8NGC6	315 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	CANT1	Q8WVQ1	401 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	SLC35B4	Q969S0	331 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	ZG16B	Q96DA0	208 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	TPD52L3	Q96J77	140 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	UCN2	Q96RP3	112 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	PTGES2	Q9H7Z7	377 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	DCLRE1B	Q9H816	532 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	S100A14	Q9HCY8	104 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	DKKL1	Q9UK85	242 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	SLC13A4	Q9UKG4	626 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	CAMK2A	Q9UQM7	478 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895	DTNA	Q9Y4J8	743 aa		13	□□□□□ -0.33
ABR-223	ENST00000573895		A0A1W2PQD3	144 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	MBD3L4	A6NDZ8	208 aa	Predicted RBP	12.99	□□□□□ -0.33
ABR-223	ENST00000573895	MBD3L3	A6NE82	208 aa	Predicted RBP	12.99	□□□□□ -0.33
ABR-223	ENST00000573895	MBD3L5	A6NJ08	208 aa	Predicted RBP	12.99	□□□□□ -0.33
ABR-223	ENST00000573895		B4DXG7	233 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	ALG1L2	C9J202	215 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895		H3BNH8	94 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	SCD	O00767	359 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	SCO2	O43819	266 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	LGI1	O95970	557 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	IL2RA	P01589	272 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	FES	P07332	822 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	NID1	P14543	1247 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	CD247	P20963	164 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	MSX1	P28360	303 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	DUSP7	Q16829	419 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	DCST1	Q5T197	706 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	RNF220	Q5VTB9	566 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	OR5M10	Q6IEU7	315 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	GDF7	Q7Z4P5	450 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	ZAR1	Q86SH2	424 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	ADGRE4P	Q86SQ3	457 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	GALNT10	Q86SR1	603 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	MCEMP1	Q8IX19	187 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	OR2M3	Q8NG83	312 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	OR4C3	Q8NH37	302 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	12.99	□□□□□ -0.33
ABR-223	ENST00000573895	GEMIN6	Q8WXD5	167 aa	Known RBP	12.99	□□□□□ -0.33
ABR-223	ENST00000573895	SLC47A1	Q96FL8	570 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	TBL1XR1	Q9BZK7	514 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	DSN1	Q9H410	356 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	SLC24A3	Q9HC58	644 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	IL1RAP	Q9NPH3	570 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	ZNF629	Q9UEG4	869 aa	Predicted RBP	12.99	□□□□□ -0.33
ABR-223	ENST00000573895	AURKC	Q9UQB9	309 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.99	□□□□□ -0.33
ABR-223	ENST00000573895	SLC9A8	Q9Y2E8	581 aa		12.99	□□□□□ -0.33
ABR-223	ENST00000573895	PDZD2	O15018	2839 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	KIAA1549	Q9HCM3	1950 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	TMEM229A	B2RXF0	380 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	ANGPTL1	O95841	491 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	OPN1SW	P03999	348 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	FCGR1A	P12314	374 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	ZNF708	P17019	499 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	ITGA2	P17301	1181 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	LHX2	P50458	406 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	EEF1A1	P68104	462 aa	Known RBP	12.98	□□□□□ -0.33
ABR-223	ENST00000573895	KCNJ10	P78508	379 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	GRAMD1B	Q3KR37	738 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	OLIG3	Q7RTU3	272 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	PIWIL3	Q7Z3Z3	882 aa	Known RBP	12.98	□□□□□ -0.33
ABR-223	ENST00000573895	MARCH3	Q86UD3	253 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	VRK2	Q86Y07	508 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	GRAMD2A	Q8IUY3	354 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	MISP	Q8IVT2	679 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	SMYD1	Q8NB12	490 aa		12.98	□□□□□ -0.33
ABR-223	ENST00000573895	DUSP19	Q8WTR2	217 aa		12.98	□□□□□ -0.33

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