RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 LACC1Q8IV20 430 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 CLIP4Q8N3C7 705 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 LILRB4Q8NHJ6 448 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 POC1BQ8TC44 478 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 ZPLD1Q8TCW7 415 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 SMPDL3BQ92485 455 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 KCTD14Q9BQ13 255 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-213ENST00000573577 PAQR5Q9NXK6 330 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-213ENST00000573577 ADA2Q9NZK5 511 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 Q9UFV3 132 aa12.2□□□□□ -0.46
RPAIN-213ENST00000573577 SPIN1Q9Y657 262 aaPredicted RBP12.2□□□□□ -0.46
RPAIN-213ENST00000573577 CD8B2A6NJW9 211 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 FAM90A27PA6NNH2 459 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 KDM4EB2RXH2 506 aaPredicted RBP12.19□□□□□ -0.46
RPAIN-213ENST00000573577 SHISA8B8ZZ34 492 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 SYT5O00445 386 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 NME4O00746 187 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 GSTA4O15217 222 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 GMNNO75496 209 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 NTN1O95631 604 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 C8BP07358 591 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 GKN3PP0CG01 181 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 PSMA4P25789 261 aaKnown RBP12.19□□□□□ -0.46
RPAIN-213ENST00000573577 FKBP2P26885 142 aaKnown RBP12.19□□□□□ -0.46
RPAIN-213ENST00000573577 SLC1A3P43003 542 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 DLX5P56178 289 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 NCALDP61601 193 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 PLAURQ03405 335 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 DMTNQ08495 405 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 MERTKQ12866 999 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 SPATS1Q496A3 300 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 NSUN5P2Q63ZY6 315 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 WBP2NLQ6ICG8 309 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 C3orf33Q6P1S2 294 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 UBQLNLQ8IYU4 475 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 SMYD1Q8NB12 490 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 TRIB1Q96RU8 372 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 KLHDC3Q9BQ90 382 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 CALHM2Q9HA72 323 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 TMEM181Q9P2C4 612 aa12.19□□□□□ -0.46
RPAIN-213ENST00000573577 PHF3Q92576 2039 aaKnown RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 HSPB2A8KAH6 182 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 B2RBV5 119 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 C19orf84I3L1E1 186 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 GPR37O15354 613 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 SEC14L5O43304 696 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 HNRNPRO43390 633 aaKnown RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 TOXO94900 526 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 OPN1SWP03999 348 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 TIMP3P35625 211 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 ACAA2P42765 397 aaKnown RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 KCNJ5P48544 419 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 GSK3BP49841 420 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 MAP2K6P52564 334 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 RGS8P57771 180 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 SLC25A3Q00325 362 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 HSPB2Q16082 182 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 SAMD4BQ5PRF9 694 aaKnown RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 ESPNLQ6ZVH7 1005 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 PLEKHM3Q6ZWE6 761 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 RANBP3LQ86VV4 465 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 DEFB107AQ8IZN7 70 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 LILRA2Q8N149 483 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 SLC25A43Q8WUT9 341 aaPredicted RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 LZICQ8WZA0 190 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 PROX1Q92786 737 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 TAMM41Q96BW9 452 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 TUBA1CQ9BQE3 449 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 UCK2Q9BZX2 261 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 KCNJ16Q9NPI9 418 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 RPS6KB2Q9UBS0 482 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
RPAIN-213ENST00000573577 BAG5Q9UL15 447 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 SLC9A8Q9Y2E8 581 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 CHST2Q9Y4C5 530 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 PCNX3Q9H6A9 2034 aa12.18□□□□□ -0.46
RPAIN-213ENST00000573577 CRYBG3Q68DQ2 2970 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 HEATR5AQ86XA9 2040 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 CELSR2Q9HCU4 2923 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 NKX2-6A6NCS4 301 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 MBD3L4A6NDZ8 208 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 MBD3L3A6NE82 208 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 MBD3L5A6NJ08 208 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 EIF1AYO14602 144 aaKnown RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 AP3D1O14617 1153 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 TPST1O60507 370 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 ADAM11O75078 769 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 GCM2O75603 506 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 LGI1O95970 557 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 COX6B1P14854 86 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 SLC7A1P30825 629 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 CEACAM8P31997 349 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 KDELR2P33947 212 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 SFTPDP35247 375 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 POLR2HP52434 150 aaKnown RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 TFF3Q07654 80 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 SGCBQ16585 318 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 DUSP7Q16829 419 aa12.17□□□□□ -0.46
RPAIN-213ENST00000573577 LRRC23Q53EV4 343 aaPredicted RBP12.17□□□□□ -0.46
RPAIN-213ENST00000573577 ADGRE4PQ86SQ3 457 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms