RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 LY6G6FQ5SQ64 297 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 LCE1DQ5T752 114 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 DDI2Q5TDH0 399 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 C3orf33Q6P1S2 294 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC23A3Q6PIS1 610 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PGAP1Q75T13 922 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SSX7Q7RTT5 188 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 OR2W3Q7Z3T1 314 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SPRED2Q7Z698 418 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 HPS6Q86YV9 775 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ARHGEF19Q8IW93 802 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 KIF2BQ8N4N8 673 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 TMEM156Q8N614 296 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ARL14EPQ8N8R7 260 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 OR13C5Q8NGS8 318 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 OR13J1Q8NGT2 312 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ABHD4Q8TB40 342 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 THAP6Q8TBB0 222 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ARRDC2Q8TBH0 407 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 BADQ92934 168 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 MYDGFQ969H8 173 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CMTM5Q96DZ9 223 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNF419Q96HQ0 510 aaPredicted RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 CNN2Q99439 309 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 TIMP4Q99727 224 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PRRT1Q99946 306 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SPATA25Q9BR10 227 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 FEM1AQ9BSK4 669 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC22A4Q9H015 551 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 NXF5Q9H1B4 397 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 TLE6Q9H808 572 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 NIPAL2Q9H841 368 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PARVBQ9HBI1 364 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 FGF21Q9NSA1 209 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PLEKHJ1Q9NW61 149 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 PPP1R3CQ9UQK1 317 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 EIF3LQ9Y262 564 aaKnown RBP4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC6A5Q9Y345 797 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 RAB3GAP2Q9H2M9 1393 aa4.48□□□□□ -1.69
TOPBP1-210ENST00000572787 ADGRA3Q8IWK6 1321 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 GNG14A0A1W2PPG7 69 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 A0A1W2PQL4 384 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 SERINC4A6NH21 518 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 MYMKA6NI61 221 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 NPIPB8E9PQR5 432 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 GAPDHSO14556 408 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 RRHO14718 337 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PSTPIP1O43586 416 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 RFPL2O75678 378 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 NXPH2O95156 264 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 LYPLA2O95372 231 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 TNFAIP8O95379 198 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 LATS1O95835 1130 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 IFNA5P01569 189 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 H1F0P07305 194 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 RPS17P08708 135 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PRSS56P0CW18 603 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 MBL2P11226 248 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 HOXB2P14652 356 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 H2AFXP16104 143 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PSMC3P17980 439 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 NPR2P20594 1047 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ZP3P21754 424 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 CCNE1P24864 410 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 HMGB2P26583 209 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 HNRNPH1P31943 449 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PIGAP37287 484 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 MAGEA3P43357 314 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PDX1P52945 283 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 SPCS3P61009 180 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 RPS4XP62701 263 aaKnown RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 NTHL1P78549 312 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 CCL7P80098 99 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 KLF5Q13887 457 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 GRM7Q14831 915 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 OPCMLQ14982 345 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ZNHIT3Q15649 155 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 C1orf189Q5VU69 101 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 VWA1Q6PCB0 445 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 LRRC31Q6UY01 552 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 C17orf107Q6ZR85 190 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 Q75L30 129 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 SSX6Q7RTT6 188 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 UNC93AQ86WB7 457 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC35F2Q8IXU6 374 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 PGAM4Q8N0Y7 254 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 Q8N402 240 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 DHRSXQ8N5I4 330 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 LMNTD1Q8N9Z9 388 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 OR6K2Q8NGY2 324 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 FGFBP3Q8TAT2 258 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ACTL9Q8TC94 416 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 ADAMTS16Q8TE57 1224 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 C22orf15Q8WYQ4 148 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC35C1Q96A29 364 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 APH1AQ96BI3 265 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 FAM84BQ96KN1 310 aaPredicted RBP4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 MBOAT7Q96N66 472 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 FCRL5Q96RD9 977 aa4.47□□□□□ -1.69
TOPBP1-210ENST00000572787 SLC6A7Q99884 636 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms