RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OR4N5Q8IXE1 308 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 FTMTQ8N4E7 242 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF614Q8N883 585 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 GRHL3Q8TE85 626 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 CMTM3Q96MX0 182 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 SERINC2Q96SA4 455 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 CFHR5Q9BXR6 569 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 ENKD1Q9H0I2 346 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 C20orf85Q9H1P6 137 aa9.96□□□□□ -0.82
CCDC40-207ENST00000572253 EDNRAP25101 427 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 PPM1FP49593 454 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 VSX2P58304 361 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 FXYD6P3P58550 94 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 TSPAN5P62079 268 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CAMK2DQ13557 499 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 PDGFRLQ15198 375 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 METTL11BQ5VVY1 283 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF425Q6IV72 752 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF613Q6PF04 617 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CMIPQ8IY22 773 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 SLC38A6Q8IZM9 456 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 SYS1Q8N2H4 156 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CDRT4Q8N9R6 151 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 OR13C5Q8NGS8 318 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 MSANTD3Q96H12 275 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CNN2Q99439 309 aaKnown RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 EVA1AQ9H8M9 152 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 NRIP3Q9NQ35 241 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 RPS6KB2Q9UBS0 482 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 AK6Q9Y3D8 172 aaKnown RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 LRRC72A6NJI9 287 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 MID1O15344 667 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 KHDRBS3O75525 346 aaKnown RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 SC5DO75845 299 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 GYPBP06028 91 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CPMP14384 443 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 NT5EP21589 574 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 BLVRAP53004 296 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 STX4Q12846 297 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CDK5R1Q15078 307 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 WDR88Q6ZMY6 472 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 POMGNT2Q8NAT1 580 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 LGALS14Q8TCE9 139 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 POF1BQ8WVV4 589 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 SMIM19Q96E16 107 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CCDC120Q96HB5 630 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 C10orf90Q96M02 699 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 ZDHHC4Q9NPG8 344 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 C19orf53Q9UNZ5 99 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 A0A0B4J203 849 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 TRBV2A0A0J9YWF9 115 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 PRICKLE3O43900 615 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 OR2T7P0C7T2 308 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 PRKACBP22694 351 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 SIRPAP78324 504 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 IKZF1Q13422 519 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 KLF9Q13886 244 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 LGALSLQ3ZCW2 172 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 RPL22L1Q6P5R6 122 aaKnown RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF527Q8NB42 609 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 OR4E2Q8NGC2 313 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 OR2T27Q8NH04 317 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 CEP76Q8TAP6 659 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 PHYHIPQ92561 330 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 TTTY10Q9BZA0 68 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 METTL17Q9H7H0 456 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 GPN1Q9HCN4 374 aaPredicted RBP9.95□□□□□ -0.82
CCDC40-207ENST00000572253 OR6C2Q9NZP2 312 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 DPP7Q9UHL4 492 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 GNG8Q9UK08 70 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 AUP1Q9Y679 476 aa9.95□□□□□ -0.82
CCDC40-207ENST00000572253 OGG1O15527 345 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 WNT1P04628 370 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 IFNA16P05015 189 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 SYPP08247 313 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 POLR2CP19387 275 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 PSMB1P20618 241 aaKnown RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 CCR9P51686 369 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 DEFB134Q4QY38 66 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 SFRP4Q6FHJ7 346 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 MEIOBQ8N635 442 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 OR52E2Q8NGJ4 325 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 SLC22A18Q96BI1 424 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 ZMYND19Q96E35 227 aaPredicted RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 C1QTNF7Q9BXJ2 289 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 HEXA-AS1Q9H8Q6 139 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 DUSP22Q9NRW4 184 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 ST6GALNAC2Q9UJ37 374 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 PLEKHM1Q9Y4G2 1056 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 NPIPA5A0A0B4J1W7 369 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 CENPVL1A0A0U1RR11 272 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 NPIPA7E9PJI5 369 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 KHNYNO15037 678 aaKnown RBP9.94□□□□□ -0.82
CCDC40-207ENST00000572253 KRT33AO76009 404 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 TOXO94900 526 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 ATP1B1P05026 303 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 NPIPA8P0DM63 369 aa9.94□□□□□ -0.82
CCDC40-207ENST00000572253 CLUP10909 449 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms