RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 ST3GAL4Q11206 333 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 TRIP6Q15654 476 aaKnown RBP17.77■□□□□ 0.43
RPAIN-210ENST00000571613 CLEC12AQ5QGZ9 265 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 SYT6Q5T7P8 510 aaPredicted RBP17.77■□□□□ 0.43
RPAIN-210ENST00000571613 PIP4P1Q86T03 277 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 ARSGQ96EG1 525 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 LRR1Q96L50 414 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 SAMD8Q96LT4 415 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 IMMP1LQ96LU5 166 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 LHPPQ9H008 270 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 ADAM19Q9H013 955 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 UBQLN3Q9H347 655 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 CXorf56Q9H5V9 222 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 GPR83Q9NYM4 423 aa17.77■□□□□ 0.43
RPAIN-210ENST00000571613 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.77■□□□□ 0.43
RPAIN-210ENST00000571613 TMEM200CA6NKL6 621 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 WWP2O00308 870 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 SURF4O15260 269 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 PRODHO43272 600 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 PTP4A3O75365 173 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 NADKO95544 446 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-210ENST00000571613 ICAM2P13598 275 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 ITPKBP27987 946 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 SLC6A6P31641 620 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 ST13P50502 369 aaKnown RBP17.76■□□□□ 0.43
RPAIN-210ENST00000571613 TMBIM6P55061 237 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 KLHL22Q53GT1 634 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 SYT14P1Q58G82 188 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 SLC30A6Q6NXT4 461 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 B3GNT6Q6ZMB0 384 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 NDUFAF7Q7L592 441 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 ESX1Q8N693 406 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 CDCA4Q9BXL8 241 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 YIPF3Q9GZM5 350 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 FN3KQ9H479 309 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 LIN28AQ9H9Z2 209 aaKnown RBP17.76■□□□□ 0.43
RPAIN-210ENST00000571613 SDHAF3Q9NRP4 125 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 DNAJC27Q9NZQ0 273 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 HS3ST3B1Q9Y662 390 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 ZNF318Q5VUA4 2279 aa17.76■□□□□ 0.43
RPAIN-210ENST00000571613 OIP5O43482 229 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 TRMUO75648 421 aaKnown RBP17.75■□□□□ 0.43
RPAIN-210ENST00000571613 FADS2O95864 444 aaKnown RBP17.75■□□□□ 0.43
RPAIN-210ENST00000571613 COX6A1P12074 109 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 GP1BBP13224 206 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 RPS15P62841 145 aaKnown RBP17.75■□□□□ 0.43
RPAIN-210ENST00000571613 SSPNQ14714 243 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 ANKDD1AQ495B1 522 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 UBE2UQ5VVX9 321 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 RNLSQ5VYX0 342 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 DND1Q8IYX4 353 aaKnown RBP17.75■□□□□ 0.43
RPAIN-210ENST00000571613 LNX2Q8N448 690 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 OR4Q3Q8NH05 313 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 B4GALNT2Q8NHY0 566 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 THAP3Q8WTV1 239 aaPredicted RBP17.75■□□□□ 0.43
RPAIN-210ENST00000571613 TMEM234Q8WY98 164 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 FGF11Q92914 225 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 HGDQ93099 445 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 SH3YL1Q96HL8 342 aaPredicted RBP17.75■□□□□ 0.43
RPAIN-210ENST00000571613 ZNF582Q96NG8 517 aaPredicted RBP17.75■□□□□ 0.43
RPAIN-210ENST00000571613 TSC22D3Q99576 134 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 SPRY4Q9C004 299 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 PTTG2Q9NZH5 202 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 ZNF337Q9Y3M9 751 aa17.75■□□□□ 0.43
RPAIN-210ENST00000571613 NSG1A0A0A6YYJ2 146 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 KDM4EB2RXH2 506 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-210ENST00000571613 SCO2O43819 266 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 STSP08842 583 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 FBXO45P0C2W1 286 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 DBTP11182 482 aaKnown RBP17.74■□□□□ 0.43
RPAIN-210ENST00000571613 TCN2P20062 427 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 MSX1P28360 303 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 GSTT1P30711 240 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 HTR3AP46098 478 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 DESI1Q6ICB0 168 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 CCDC81Q6ZN84 652 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 ANKK1Q8NFD2 765 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 OR13C2Q8NGS9 318 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 RAB2BQ8WUD1 216 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 RNF138Q8WVD3 245 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 LIPHQ8WWY8 451 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 ISOC1Q96CN7 298 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 TMEM80Q96HE8 168 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 DOK1Q99704 481 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 BCL7BQ9BQE9 202 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 MESP1Q9BRJ9 268 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 RHNO1Q9BSD3 238 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 NDEL1Q9GZM8 345 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 MRPS18AQ9NVS2 196 aaKnown RBP17.74■□□□□ 0.43
RPAIN-210ENST00000571613 TOR4AQ9NXH8 423 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 H2AFY2Q9P0M6 372 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-210ENST00000571613 WARS2Q9UGM6 360 aaKnown RBP17.74■□□□□ 0.43
RPAIN-210ENST00000571613 TCFL5Q9UL49 500 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 FARSAQ9Y285 508 aaKnown RBP17.74■□□□□ 0.43
RPAIN-210ENST00000571613 TEX51A0A1B0GUA7 166 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 BHLHE40O14503 412 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 NDUFB2O95178 105 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 NUDT14O95848 222 aa17.74■□□□□ 0.43
RPAIN-210ENST00000571613 C21orf33P30042 268 aaPredicted RBP17.74■□□□□ 0.43
RPAIN-210ENST00000571613 MASP1P48740 699 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms