RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 ZNF749O43361 778 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 KLHL41O60662 606 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 BANF1O75531 89 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 PRKRAO75569 313 aaKnown RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 KIAA0754O94854 1291 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SLC16A8O95907 504 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 IGHEP01854 428 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ANXA5P08758 320 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 RAB40ALP0C0E4 278 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 TPBGLP0DKB5 382 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 EZRP15311 586 aaKnown RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 STMN1P16949 149 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 TCN2P20062 427 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SAT1P21673 171 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CRABP2P29373 138 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SSTR1P30872 391 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SLC6A6P31641 620 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 HPDP32754 393 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 GP5P40197 560 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SLC26A3P40879 764 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CCR10P46092 362 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 HNMTP50135 292 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 BMXP51813 675 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CLNS1AP54105 237 aaKnown RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 CDKN2DP55273 166 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ATP6V0D1P61421 351 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 PPP1CAP62136 330 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SKP1P63208 163 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 IRX1P78414 480 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 CX3CL1P78423 397 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 DCDP81605 110 aaKnown RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 PRDX1Q06830 199 aaKnown RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 TSTA3Q13630 321 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 TMEM187Q14656 261 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 TGIF1Q15583 401 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 KCTD19Q17RG1 926 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 TAF1BQ53T94 588 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 ZNF789Q5FWF6 425 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 DCAF10Q5QP82 559 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ADAMTSL4-AS1Q5T5F5 129 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 FAM205BPQ63HN1 556 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CAPN13Q6MZZ7 669 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 RHBDD2Q6NTF9 364 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CDHR3Q6ZTQ4 885 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 FRA10AC1Q70Z53 315 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SLC16A9Q7RTY1 509 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ADCK2Q7Z695 626 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SYVN1Q86TM6 617 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 MYPOPQ86VE0 399 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 CTAGE3PQ8IX95 158 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CPNE9Q8IYJ1 553 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 TCAIMQ8N3R3 496 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 DNAJC22Q8N4W6 341 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 C2orf73Q8N5S3 287 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 TTC29Q8NA56 475 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 POC5Q8NA72 575 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 OR2L3Q8NG85 312 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 OR2A1Q8NGT9 310 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 FBXO25Q8TCJ0 367 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 LKAAEAR1Q8TD35 194 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CD200R1Q8TD46 325 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 PTPMT1Q8WUK0 201 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 EEF1AKMT1Q8WVE0 214 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.5□□□□□ -1.85
NUP88-202ENST00000570937 MR1Q95460 341 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 GMPPAQ96IJ6 420 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 SLC45A3Q96JT2 553 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CYTH2Q99418 400 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 NDNQ99608 321 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SELENOSQ9BQE4 189 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CCDC77Q9BR77 488 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 DPH7Q9BTV6 452 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CAPS2Q9BXY5 557 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 WDR13Q9H1Z4 485 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 MMP27Q9H306 513 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 RHOJQ9H4E5 214 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CNOT10Q9H9A5 744 aaKnown RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 APMAPQ9HDC9 416 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 MRPS30Q9NP92 439 aaKnown RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 CCDC177Q9NQR7 707 aaPredicted RBP3.5□□□□□ -1.85
NUP88-202ENST00000570937 ATAD3AQ9NVI7 634 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SPHK1Q9NYA1 384 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 EURLQ9NYK6 297 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 CACNG5Q9UF02 275 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 GRIP1Q9Y3R0 1128 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 KLK4Q9Y5K2 254 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 RP1P56715 2156 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 SCN8AQ9UQD0 1980 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 WDFY3Q8IZQ1 3526 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 MYLKQ15746 1914 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ASPMQ8IZT6 3477 aa3.5□□□□□ -1.85
NUP88-202ENST00000570937 ZFC3H1O60293 1989 aaKnown RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 CHD8Q9HCK8 2581 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 IGHV4-4A0A075B6R2 117 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 LOC100509620A0A075B734 347 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 KCNE1BA0A087WTH5 132 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 A0A087WUV0 522 aaPredicted RBP3.49□□□□□ -1.85
NUP88-202ENST00000570937 LOC101059948A0A1B0GTJ6 334 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 A0A1B0GX78 115 aa3.49□□□□□ -1.85
NUP88-202ENST00000570937 HYKKA2RU49 373 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms