RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 IL1RL1Q01638 556 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 GK3PQ14409 553 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 TRAM2Q15035 370 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 ZNF791Q3KP31 576 aaPredicted RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 ZIK1Q3SY52 487 aaPredicted RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 DCAF10Q5QP82 559 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 KDM4DQ6B0I6 523 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 ZNF770Q6IQ21 691 aaPredicted RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 NUP54Q7Z3B4 507 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 ZNF440Q8IYI8 595 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 CADM2Q8N3J6 435 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 SLC15A4Q8N697 577 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 AQP11Q8NBQ7 271 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 OR4K5Q8NGD3 323 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 TMEM255BQ8WV15 326 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 PSMF1Q92530 271 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 NR4A3Q92570 626 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 TMCO6Q96DC7 493 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 THOC3Q96J01 351 aaKnown RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 ZNF570Q96NI8 536 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 MBOAT4Q96T53 435 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 FEVQ99581 238 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 NIPSNAP1Q9BPW8 284 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 PSD2Q9BQI7 771 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 PRSS27Q9BQR3 290 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 ADI1Q9BV57 179 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 POLR2J2Q9GZM3 115 aaKnown RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 POLR2J3Q9H1A7 115 aaKnown RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 EXOSC3Q9NQT5 275 aaKnown RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 KLRF1Q9NZS2 232 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 TMCC3Q9ULS5 477 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 YARS2Q9Y2Z4 477 aaKnown RBP9.12□□□□□ -0.95
GDE1-205ENST00000569899 NCKAP5O14513 1909 aa9.12□□□□□ -0.95
GDE1-205ENST00000569899 A0A087WUU8 490 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 ARRDC5A6NEK1 342 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 B4DXG7 233 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 OR10H3O60404 316 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 HTR3BO95264 441 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 UQCRBP14927 111 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 IFNA8P32881 189 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 PTGDSP41222 190 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 GAS1P54826 345 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 NHSL2Q5HYW2 709 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 PRAMEF20Q5VT98 475 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 H3F3CQ6NXT2 135 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 PGBD2Q6P3X8 592 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 ZNF613Q6PF04 617 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 OPN5Q6U736 354 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 IL20RBQ6UXL0 311 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 MEX3DQ86XN8 651 aaKnown RBP9.11□□□□□ -0.95
GDE1-205ENST00000569899 CYGBQ8WWM9 190 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 ZNF524Q96C55 264 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 IP6K3Q96PC2 410 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 SCNM1Q9BWG6 230 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 OSBPL11Q9BXB4 747 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 TRIM2Q9C040 744 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 LAT2Q9GZY6 243 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 TOR3AQ9H497 397 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 RIBC2Q9H4K1 309 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 ANKRD19PQ9H560 264 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 METTL7AQ9H8H3 244 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 TMEM27Q9HBJ8 222 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 KRT84Q9NSB2 600 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 ADAM30Q9UKF2 790 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 RAB26Q9ULW5 256 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 WASF3Q9UPY6 502 aa9.11□□□□□ -0.95
GDE1-205ENST00000569899 CHCHD2Q9Y6H1 151 aaPredicted RBP9.11□□□□□ -0.95
GDE1-205ENST00000569899 ARGFXA6NJG6 315 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 NKX2-8O15522 239 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 CHP2O43745 196 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 LINGO3P0C6S8 592 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 CCL3P10147 92 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 POU2F1P14859 743 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 FSTP19883 344 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 ITGA3P26006 1051 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 MST1P26927 711 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 IDH2P48735 452 aaKnown RBP9.1□□□□□ -0.95
GDE1-205ENST00000569899 RAD23AP54725 363 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 UGT2B15P54855 530 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 MERTKQ12866 999 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 AIMP2Q13155 320 aaKnown RBP9.1□□□□□ -0.95
GDE1-205ENST00000569899 KCNAB2Q13303 367 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 CDK5R2Q13319 367 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 ALG10BQ5I7T1 473 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 ZNF730Q6ZMV8 503 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 APLFQ8IW19 511 aaPredicted RBP9.1□□□□□ -0.95
GDE1-205ENST00000569899 CHERPQ8IWX8 916 aaKnown RBP9.1□□□□□ -0.95
GDE1-205ENST00000569899 BEST3Q8N1M1 668 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 TMEM156Q8N614 296 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 LSMEM1Q8N8F7 131 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 DUSP19Q8WTR2 217 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 ACOT11Q8WXI4 607 aaPredicted RBP9.1□□□□□ -0.95
GDE1-205ENST00000569899 SLC38A4Q969I6 547 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 RDH12Q96NR8 316 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 PSMG3-AS1Q96PY0 264 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 HPF1Q9NWY4 346 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 ANKRD10Q9NXR5 420 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 REV1Q9UBZ9 1251 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 ICAM5Q9UMF0 924 aa9.1□□□□□ -0.95
GDE1-205ENST00000569899 LRCH1Q9Y2L9 728 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms