RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 HDAC3O15379 428 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 CYTIPO60759 359 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 RAMP1O60894 148 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 STX11O75558 287 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 CYP7B1O75881 506 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 PRKD3O94806 890 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 CPSF4O95639 269 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 YES1P07947 543 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 SOD3P08294 240 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 DANCRP0C864 163 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 UBTFL6P0CB48 400 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 OR3A2P47893 321 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 NR1H2P55055 460 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 RAC3P60763 192 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 CBFBQ13951 182 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 NCMAPQ5T1S8 102 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 AP1ARQ63HQ0 302 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 STK32CQ86UX6 486 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 ZNF611Q8N823 705 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 TOR1AIP2Q8NFQ8 470 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 STEAP2Q8NFT2 490 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 KBTBD8Q8NFY9 601 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 OR5B2Q96R09 309 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 DPY30Q9C005 99 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 SAP130Q9H0E3 1048 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 GP6Q9HCN6 339 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 NPAP1Q9NZP6 1156 aa12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 MARCOQ9UEW3 520 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-211ENST00000569653 ATRQ13535 2644 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 HMGB1P1B2RPK0 211 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 OVOL3O00110 214 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 SDHDO14521 159 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 LYZL6O75951 148 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 SOX30O94993 753 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 CNOT4O95628 575 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 CSTAP01040 98 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 FESP07332 822 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 SLC7A1P30825 629 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 CDKN2CP42773 168 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 DIO1P49895 249 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 FOXG1P55316 489 aaPredicted RBP12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 NME5P56597 212 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 UFM1P61960 85 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 CHRNEQ04844 493 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 MERTKQ12866 999 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 MAPK11Q15759 364 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 DPY19L1Q2PZI1 675 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 GTF2IRD2BQ6EKJ0 949 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 ABLIM2Q6H8Q1 611 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 OGFOD2Q6N063 350 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 ADAM5Q6NVV9 412 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 C3orf33Q6P1S2 294 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 GTF2IRD2Q86UP8 949 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 CNOT9Q92600 299 aaKnown RBP12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 TESCQ96BS2 214 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 ROPN1LQ96C74 230 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 NEURL3Q96EH8 262 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 ARL5BQ96KC2 179 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 INPP5KQ9BT40 448 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 CCDC106Q9BWC9 280 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 OR11A1Q9GZK7 315 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 TIGARQ9NQ88 270 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 CTPS2Q9NRF8 586 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 ACER3Q9NUN7 267 aa12.25□□□□□ -0.45
GTF3C1-211ENST00000569653 PRSS51A0A1B0GVH4 220 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 GJE1A6NN92 205 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 ZNF716A6NP11 495 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 HMGN4O00479 90 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 AP3D1O14617 1153 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 AK1P00568 194 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 THBS1P07996 1170 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 CHRM4P08173 479 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 PABPC4LP0CB38 370 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 KITP10721 976 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 COX5AP20674 150 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 UQCRC2P22695 453 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 IGHV1-2P23083 117 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 CLNS1AP54105 237 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 BSPH1Q075Z2 132 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 RASGEF1BQ0VAM2 473 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 PGGHGQ32M88 737 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 FAM174BQ3ZCQ3 159 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 SYT14P1Q58G82 188 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 BHLHB9Q6PI77 547 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 BHLHA15Q7RTS1 189 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 C16orf62Q7Z3J2 963 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 SPATA19Q7Z5L4 167 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 ANKFN1Q8N957 763 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 PIWIL2Q8TC59 973 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 DYDC1Q8WWB3 177 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 XAGE5Q8WWM1 108 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 ST8SIA1Q92185 356 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 KISS1RQ969F8 398 aaPredicted RBP12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 REXO5Q96IC2 774 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 CCDC115Q96NT0 180 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 HEATR1Q9H583 2144 aaKnown RBP12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 SLC6A13Q9NSD5 602 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 LAMP3Q9UQV4 416 aa12.24□□□□□ -0.45
GTF3C1-211ENST00000569653 WDR45Q9Y484 360 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms