RNA–Protein interactions for RNA: ENST00000568548.5

VAC14-210, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 2,945 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-210ENST00000568548 OAFQ86UD1 273 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 LRRC28Q86X40 367 aaPredicted RBP15.84■□□□□ 0.13
VAC14-210ENST00000568548 RAB42Q8N4Z0 105 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 TMEM52Q8NDY8 209 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 OR52N1Q8NH53 320 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 PATE1Q8WXA2 126 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 KISS1RQ969F8 398 aaPredicted RBP15.84■□□□□ 0.13
VAC14-210ENST00000568548 HS6ST2Q96MM7 605 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 NDC1Q9BTX1 674 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 CACYBPQ9HB71 228 aaKnown RBP15.84■□□□□ 0.13
VAC14-210ENST00000568548 CD93Q9NPY3 652 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 MEPEQ9NQ76 525 aaPredicted RBP15.84■□□□□ 0.13
VAC14-210ENST00000568548 TBC1D29Q9UFV1 150 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.84■□□□□ 0.13
VAC14-210ENST00000568548 ACOD1A6NK06 481 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 GMDSO60547 372 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 PDGFAP04085 211 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 PROS1P07225 676 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 ANXA11P50995 505 aaKnown RBP15.84■□□□□ 0.13
VAC14-210ENST00000568548 MLC1Q15049 377 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 SHHQ15465 462 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 ZIC1Q15915 447 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 LINGO2Q7L985 606 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 SLC44A3Q8N4M1 653 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 OR4N2Q8NGD1 307 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 OR52E2Q8NGJ4 325 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.84■□□□□ 0.132e-6■■■■□ 20.9
VAC14-210ENST00000568548 FOLH1BQ9HBA9 442 aa15.84■□□□□ 0.13
VAC14-210ENST00000568548 LOC105371267A0A1B0GV96 52 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 AGBL4Q5VU57 503 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 ADAMTSL4Q6UY14 1074 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 ZNF765Q7L2R6 523 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 CNOT9Q92600 299 aaKnown RBP15.83■□□□□ 0.12
VAC14-210ENST00000568548 TSACCQ96A04 125 aaPredicted RBP15.83■□□□□ 0.12
VAC14-210ENST00000568548 SEMA4CQ9C0C4 833 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 FGF22Q9HCT0 170 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 ADAM29Q9UKF5 820 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 POM121BA6NF01 834 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 C1QTNF3-AMACRE9PGA6 284 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 KLF4O43474 513 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 HMGN1P05114 100 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 CEACAM5P06731 702 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 GABRA3P34903 492 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 ZNF85Q03923 595 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 C19orf57Q0VDD7 668 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 SGCGQ13326 291 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 EXOSC2Q13868 293 aaKnown RBP15.83■□□□□ 0.12
VAC14-210ENST00000568548 TMEM52BQ4KMG9 183 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 STPG1Q5TH74 334 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 TANGO2Q6ICL3 276 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 METAP1DQ6UB28 335 aaPredicted RBP15.83■□□□□ 0.12
VAC14-210ENST00000568548 LRRC25Q8N386 305 aaPredicted RBP15.83■□□□□ 0.12
VAC14-210ENST00000568548 C1QTNF2Q9BXJ5 285 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 PIGUQ9H490 435 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 GNG8Q9UK08 70 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 POLHQ9Y253 713 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 PRELID1Q9Y255 219 aa15.83■□□□□ 0.12
VAC14-210ENST00000568548 A0A0G2JK05 382 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 BHLHE40O14503 412 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 CTSVO60911 334 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 RGS11O94810 467 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 RPP14O95059 124 aaKnown RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 MT-ND5P03915 603 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 ATF4P18848 351 aaPredicted RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 RPS27P42677 84 aaKnown RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 SELENOPP49908 381 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 SNTB2Q13425 540 aaKnown RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 RPE65Q16518 533 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 LGALSLQ3ZCW2 172 aaPredicted RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 FAAH2Q6GMR7 532 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 FTMTQ8N4E7 242 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 FAM98AQ8NCA5 519 aaKnown RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 CLEC4MQ9H2X3 399 aaPredicted RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 MTHFD2LQ9H903 347 aaPredicted RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 ASB6Q9NWX5 421 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3DA0A087WVF3 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3IA0A087WXS9 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3EA0A087X179 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3KA0A087X1G2 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 A0A1W2PQU0 124 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3FA6NER0 549 aaPredicted RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3LB9A6J9 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 SMAD9O15198 467 aaKnown RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 CTSBP07858 339 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3HP0C7X1 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 POLR2CP19387 275 aaPredicted RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 RAB3BP20337 219 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3GQ6DHY5 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3CQ6IPX1 549 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TMEM64Q6YI46 380 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 NRROSQ86YC3 692 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 TBC1D3Q8IZP1 549 aaPredicted RBP15.82■□□□□ 0.12
VAC14-210ENST00000568548 COX18Q8N8Q8 333 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 OR6K6Q8NGW6 343 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 OR4C6Q8NH72 309 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 GHITMQ9H3K2 345 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 KLK11Q9UBX7 282 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 ATG2AQ2TAZ0 1938 aa15.82■□□□□ 0.12
VAC14-210ENST00000568548 MPC2O95563 127 aa15.81■□□□□ 0.12
VAC14-210ENST00000568548 NGFRP08138 427 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms