RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 H6PDO95479 791 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 GSNP06396 782 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 NID1P14543 1247 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 PPP3CBP16298 524 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 PGM1P36871 562 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 CDKN2CP42773 168 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 SESN3P58005 492 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 MERTKQ12866 999 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 GSTA3Q16772 222 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 DEFB113Q30KQ7 82 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 SLC9B1Q4ZJI4 515 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 AP1ARQ63HQ0 302 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 ANKRD34AQ69YU3 496 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 SLC43A2Q8N370 569 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 FITM2Q8N6M3 262 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 FAM71CQ8NEG0 241 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 PIK3IP1Q96FE7 263 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 THOC1Q96FV9 657 aaKnown RBP12.88□□□□□ -0.35
CMTM3-215ENST00000568477 MARK4Q96L34 752 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 LRRC37BQ96QE4 947 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 TACO1Q9BSH4 297 aaKnown RBP12.88□□□□□ -0.35
CMTM3-215ENST00000568477 TMEM120AQ9BXJ8 343 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 QRSL1Q9H0R6 528 aaKnown RBP12.88□□□□□ -0.35
CMTM3-215ENST00000568477 C12orf49Q9H741 205 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 GP6Q9HCN6 339 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 SERINC1Q9NRX5 453 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.88□□□□□ -0.35
CMTM3-215ENST00000568477 ACER3Q9NUN7 267 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 KLHL13Q9P2N7 655 aa12.88□□□□□ -0.35
CMTM3-215ENST00000568477 RRP15Q9Y3B9 282 aaKnown RBP12.88□□□□□ -0.35
CMTM3-215ENST00000568477 A0A1W2PNR3 127 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 PRAMEF27A3QJZ7 478 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 RFXANKO14593 260 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 DIAPH2O60879 1101 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 SLC22A3O75751 556 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 PRKD3O94806 890 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 KRT75O95678 551 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 C1QCP02747 245 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 IL6P05231 212 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 RAC3P60763 192 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 CHRNEQ04844 493 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 STAC2Q6ZMT1 411 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 PLEKHM3Q6ZWE6 761 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 MAVSQ7Z434 540 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 HMGN2P46Q86SG4 172 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 TGIF2LYQ8IUE0 185 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 ANKFN1Q8N957 763 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 ZNF563Q8TA94 476 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 PNPT1Q8TCS8 783 aaKnown RBP12.87□□□□□ -0.35
CMTM3-215ENST00000568477 SLC25A43Q8WUT9 341 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-215ENST00000568477 STON2Q8WXE9 905 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 TRNT1Q96Q11 434 aaKnown RBP12.87□□□□□ -0.35
CMTM3-215ENST00000568477 OR5B2Q96R09 309 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 EXOSC3Q9NQT5 275 aaKnown RBP12.87□□□□□ -0.35
CMTM3-215ENST00000568477 ZIM2Q9NZV7 527 aa12.87□□□□□ -0.35
CMTM3-215ENST00000568477 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
CMTM3-215ENST00000568477 FLNAP21333 2647 aaKnown RBP12.87□□□□□ -0.35
CMTM3-215ENST00000568477 IGHV3-15A0A0B4J1V0 119 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 UBDO15205 165 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 BCAS1O75363 584 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-215ENST00000568477 ATP5HO75947 161 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 UBOX5O94941 541 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 NR2F1P10589 423 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 ENPP1P22413 925 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 RYKP34925 604 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 MAGEA8P43361 318 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 AQP5P55064 265 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 KCNJ10P78508 379 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 BNIP1Q12981 228 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 GNA13Q14344 377 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 SYPL1Q16563 259 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 FAM91A1Q658Y4 838 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 TFAP2EQ6VUC0 442 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 DNAJC14Q6Y2X3 702 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-215ENST00000568477 LRRC74BQ6ZQY2 392 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 MSANTD1Q6ZTZ1 278 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 NUFIP2Q7Z417 695 aaKnown RBP12.86□□□□□ -0.35
CMTM3-215ENST00000568477 TUSC5Q8IXB3 177 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 CMIPQ8IY22 773 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 ZG16BQ96DA0 208 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 OR52B2Q96RD2 323 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 SLC38A1Q9H2H9 487 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 RMND5AQ9H871 391 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 SDR39U1Q9NRG7 319 aaPredicted RBP12.86□□□□□ -0.35
CMTM3-215ENST00000568477 KLHL9Q9P2J3 617 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 GPR52Q9Y2T5 361 aa12.86□□□□□ -0.35
CMTM3-215ENST00000568477 AGAP5A6NIR3 686 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 CCDC22O60826 627 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 ANP32DO95626 131 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 THBDP07204 575 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 YES1P07947 543 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 CHRM4P08173 479 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 TFPIP10646 304 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 CD99P14209 185 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 CD53P19397 219 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 PSMB1P20618 241 aaKnown RBP12.85□□□□□ -0.35
CMTM3-215ENST00000568477 APOBEC1P41238 236 aaKnown RBP12.85□□□□□ -0.35
CMTM3-215ENST00000568477 CSNK2A1P68400 391 aaPredicted RBP12.85□□□□□ -0.35
CMTM3-215ENST00000568477 SYT14P1Q58G82 188 aa12.85□□□□□ -0.35
CMTM3-215ENST00000568477 BEX5Q5H9J7 111 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms