RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 SLC35A5Q9BS91 424 aa16.77■□□□□ 0.28
SPSB3-210ENST00000568416 CENPHQ9H3R5 247 aa16.77■□□□□ 0.28
SPSB3-210ENST00000568416 AIG1Q9NVV5 245 aa16.77■□□□□ 0.28
SPSB3-210ENST00000568416 MARCOQ9UEW3 520 aaPredicted RBP16.77■□□□□ 0.28
SPSB3-210ENST00000568416 PRSS50Q9UI38 385 aa16.77■□□□□ 0.28
SPSB3-210ENST00000568416 TRIM64A6NGJ6 449 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 TRIM64BA6NI03 449 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 ZNF724A8MTY0 619 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 SDHDO14521 159 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 LY6G6DO95868 133 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 EDNRAP25101 427 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 S100A3P33764 101 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 APOBEC1P41238 236 aaKnown RBP16.76■□□□□ 0.27
SPSB3-210ENST00000568416 DIO1P49895 249 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 ABLIM2Q6H8Q1 611 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 ALKBH2Q6NS38 261 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 BHLHA15Q7RTS1 189 aaPredicted RBP16.76■□□□□ 0.27
SPSB3-210ENST00000568416 ZG16BQ96DA0 208 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 CCDC106Q9BWC9 280 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 POTEKPQ9BYX7 375 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 EXOSC3Q9NQT5 275 aaKnown RBP16.76■□□□□ 0.27
SPSB3-210ENST00000568416 CTPS2Q9NRF8 586 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 RNF115Q9Y4L5 304 aa16.76■□□□□ 0.27
SPSB3-210ENST00000568416 C9JVG2 144 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 HMGN4O00479 90 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 FESP07332 822 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 IL12AP29459 219 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 CHI3L1P36222 383 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-210ENST00000568416 NME5P56597 212 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 UFM1P61960 85 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 CSNK2A1P68400 391 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-210ENST00000568416 CHRNEQ04844 493 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 GPAT3Q53EU6 434 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 ZNF775Q96BV0 537 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-210ENST00000568416 ZBTB9Q96C00 473 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 CXorf56Q9H5V9 222 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 NGBQ9NPG2 151 aa16.75■□□□□ 0.27
SPSB3-210ENST00000568416 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-210ENST00000568416 CLDN24A6NM45 220 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 SULT2B1O00204 365 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 ZNF500O60304 480 aaPredicted RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 ADAM11O75078 769 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 CNOT4O95628 575 aaKnown RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 CD3EP07766 207 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 KCNJ10P78508 379 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 PDK3Q15120 406 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 GRINAQ7Z429 371 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 SPATA19Q7Z5L4 167 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 HMGN2P46Q86SG4 172 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 CROCCP2Q86T23 111 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 ATG4DQ86TL0 474 aaPredicted RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 MTDHQ86UE4 582 aaKnown RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 RNF130Q86XS8 419 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 ZNF563Q8TA94 476 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 PIWIL2Q8TC59 973 aaKnown RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 PAIP2Q9BPZ3 127 aaKnown RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 ESRP2Q9H6T0 727 aaKnown RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 CHRNA9Q9UGM1 479 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 SPIN1Q9Y657 262 aaPredicted RBP16.74■□□□□ 0.27
SPSB3-210ENST00000568416 ACANP16112 2415 aa16.74■□□□□ 0.27
SPSB3-210ENST00000568416 IGKV3D-15A0A087WSY6 115 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 CCDC154A6NI56 674 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 ZNF716A6NP11 495 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 SMAD7O15105 426 aaKnown RBP16.73■□□□□ 0.27
SPSB3-210ENST00000568416 LYZL6O75951 148 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 PMS2P2O95744 297 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 COX5AP20674 150 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 RYKP34925 604 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 CDKN2CP42773 168 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 WDR4P57081 412 aaKnown RBP16.73■□□□□ 0.27
SPSB3-210ENST00000568416 RPS4XP62701 263 aaKnown RBP16.73■□□□□ 0.27
SPSB3-210ENST00000568416 HPCAP84074 193 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 CAPRIN1Q14444 709 aaKnown RBP16.73■□□□□ 0.27
SPSB3-210ENST00000568416 SYPL1Q16563 259 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 HHATQ5VTY9 493 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.73■□□□□ 0.27
SPSB3-210ENST00000568416 GALNT5Q7Z7M9 940 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 ADGRG3Q86Y34 549 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 ARFGAP2Q8N6H7 521 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 ANKFN1Q8N957 763 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 ANKRD42Q8N9B4 389 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 CNOT9Q92600 299 aaKnown RBP16.73■□□□□ 0.27
SPSB3-210ENST00000568416 ARL5BQ96KC2 179 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 TRNT1Q96Q11 434 aaKnown RBP16.73■□□□□ 0.27
SPSB3-210ENST00000568416 PANX1Q96RD7 426 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 INPP5KQ9BT40 448 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 SLC38A1Q9H2H9 487 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 LAMP3Q9UQV4 416 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 HDGFL3Q9Y3E1 203 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 GPR45Q9Y5Y3 372 aa16.73■□□□□ 0.27
SPSB3-210ENST00000568416 FLNAP21333 2647 aaKnown RBP16.72■□□□□ 0.27
SPSB3-210ENST00000568416 DPRXA6NFQ7 191 aa16.72■□□□□ 0.27
SPSB3-210ENST00000568416 CLOCKO15516 846 aa16.72■□□□□ 0.27
SPSB3-210ENST00000568416 SNNO75324 88 aaPredicted RBP16.72■□□□□ 0.27
SPSB3-210ENST00000568416 PGRP06401 933 aa16.72■□□□□ 0.27
SPSB3-210ENST00000568416 CHRM4P08173 479 aa16.72■□□□□ 0.27
SPSB3-210ENST00000568416 DANCRP0C864 163 aa16.72■□□□□ 0.27
SPSB3-210ENST00000568416 TFPIP10646 304 aa16.72■□□□□ 0.27
SPSB3-210ENST00000568416 IGHV1-2P23083 117 aa16.72■□□□□ 0.27
SPSB3-210ENST00000568416 FKBP2P26885 142 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms