RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TNFRSF13CQ96RJ3 184 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 SPOCK3Q9BQ16 436 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 SEMA4CQ9C0C4 833 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 UBQLN3Q9H347 655 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 SLC25A19Q9HC21 320 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 PADI1Q9ULC6 663 aa6.46□□□□□ -1.37
SMG1-215ENST00000568239 COL5A1P20908 1838 aaPredicted RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 PTPRZ1P23471 2315 aaPredicted RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 SNTNA6NMZ2 147 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 TMX2-CTNND1H3BSU7 103 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 SURF4O15260 269 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 HCN1O60741 890 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 CSO75390 466 aaKnown RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 TRMUO75648 421 aaKnown RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 PTHP01270 115 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 TACR3P29371 465 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 RPL4P36578 427 aaKnown RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 ADH7P40394 386 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 RBM34P42696 430 aaKnown RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 RPS18P62269 152 aaKnown RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 TEKQ02763 1124 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 TUBA3CQ13748 450 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 TOMM34Q15785 309 aaPredicted RBP6.46□□□□□ -1.38
SMG1-215ENST00000568239 C3orf38Q5JPI3 329 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 FNDC7Q5VTL7 733 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 MEDAGQ5VYS4 303 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 PLAG1Q6DJT9 500 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 TMEM205Q6UW68 189 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 FAM198BQ6UWH4 519 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 THSD4Q6ZMP0 1018 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 SHFQ7M4L6 423 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 ZNF441Q8N8Z8 693 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 NUBPLQ8TB37 319 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 SLC35B4Q969S0 331 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 TP53INP1Q96A56 240 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 SGTBQ96EQ0 304 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 WDR54Q9H977 334 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 GALNT9Q9HCQ5 603 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 PTTG2Q9NZH5 202 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 KLRF1Q9NZS2 232 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 NCDNQ9UBB6 729 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 MYOTQ9UBF9 498 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 SIGLEC7Q9Y286 467 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 PCDHGB1Q9Y5G3 927 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 MED12Q93074 2177 aa6.46□□□□□ -1.38
SMG1-215ENST00000568239 A0A1W2PPW3 197 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 OR6C70A6NIJ9 312 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 B4E171 279 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 ALG1L2C9J202 215 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 BLOC1S5-TXNDC5H3BN57 136 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 MASP2O00187 686 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 PPM1BO75688 479 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 KLF7O75840 302 aaPredicted RBP6.45□□□□□ -1.38
SMG1-215ENST00000568239 ATE1O95260 518 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 PPP1R3DO95685 299 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 ONECUT2O95948 504 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 HMGN1P05114 100 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 UMODP07911 640 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 CELA2AP08217 269 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 TCEA1P23193 301 aaKnown RBP6.45□□□□□ -1.38
SMG1-215ENST00000568239 DCKP27707 260 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 OTX2P32243 289 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 FOLR3P41439 243 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 TSPAN7P41732 249 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 CDH11P55287 796 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 FXYD6P3P58550 94 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 RPS7P62081 194 aaKnown RBP6.45□□□□□ -1.38
SMG1-215ENST00000568239 OCLNQ16625 522 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 TIGD6Q17RP2 521 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 KLHL12Q53G59 568 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 BICRALQ6AI39 1079 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 PLBD1Q6P4A8 553 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 B3GLCTQ6Y288 498 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 CPOQ8IVL8 374 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 FAM71CQ8NEG0 241 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 C17orf47Q8NEP4 570 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 ZNF524Q96C55 264 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 TMCO6Q96DC7 493 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 LAT2Q9GZY6 243 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 CNOT2Q9NZN8 540 aaKnown RBP6.45□□□□□ -1.38
SMG1-215ENST00000568239 ERGIC3Q9Y282 383 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 ZFHX2Q9C0A1 2572 aaPredicted RBP6.45□□□□□ -1.38
SMG1-215ENST00000568239 MRPS14O60783 128 aaKnown RBP6.45□□□□□ -1.38
SMG1-215ENST00000568239 CBFA2T3O75081 653 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 ADRA2AP08913 450 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 ADORA3P0DMS8 318 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 PNMTP11086 282 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 CD36P16671 472 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 CXCR1P25024 350 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 SLC1A3P43003 542 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 SLC6A8P48029 635 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 MTNR1AP48039 350 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 CTBP2P56545 445 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 RAB15P59190 212 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 E2F1Q01094 437 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 RPL13AP3Q6NVV1 102 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 RTL4Q6ZR62 310 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 ZBTB46Q86UZ6 589 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 GHDCQ8N2G8 530 aa6.45□□□□□ -1.38
SMG1-215ENST00000568239 SUMF1Q8NBK3 374 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms