RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	GRINA	Q7Z429	371 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	HMGN2P46	Q86SG4	172 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	STK32C	Q86UX6	486 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	ZNF563	Q8TA94	476 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	CKAP2	Q8WWK9	683 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	STON2	Q8WXE9	905 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	CNOT9	Q92600	299 aa	Known RBP	12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	TACO1	Q9BSH4	297 aa	Known RBP	12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	MED18	Q9BUE0	208 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	LIME1	Q9H400	295 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	RAD21L1	Q9H4I0	556 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	PLEKHF2	Q9H8W4	249 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	TMEM45A	Q9NWC5	275 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	KLHL28	Q9NXS3	571 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	KLHL13	Q9P2N7	655 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	PRDM4	Q9UKN5	801 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	SPIN1	Q9Y657	262 aa	Predicted RBP	12.35	□□□□□ -0.43
PKD1-231	ENST00000566784	DSPP	Q9NZW4	1301 aa		12.35	□□□□□ -0.43
PKD1-231	ENST00000566784		A0A1W2PNR3	127 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	ADAM11	O75078	769 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	TFPT	P0C1Z6	253 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	ETFA	P13804	333 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	PPP3CB	P16298	524 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	HOXB9	P17482	250 aa	Predicted RBP	12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	CRYGS	P22914	178 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	DNASE1	P24855	282 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	RYK	P34925	604 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	CRAT	P43155	626 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	HTR3A	P46098	478 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	CLK1	P49759	484 aa	Known RBP	12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	ART1	P52961	327 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	CRISP3	P54108	245 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	DSTN	P60981	165 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	FADD	Q13158	208 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	EXOC3L2	Q2M3D2	409 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	GTDC1	Q4AE62	458 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	BLOC1S3	Q6QNY0	202 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	TMPPE	Q6ZT21	453 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	FUNDC1	Q8IVP5	155 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	TUSC5	Q8IXB3	177 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	PEX5L	Q8IYB4	626 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	AURKB	Q96GD4	344 aa	Predicted RBP	12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	MAGEB18	Q96M61	343 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	OR5B2	Q96R09	309 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	FOXC2	Q99958	501 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	KLHL4	Q9C0H6	718 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	PAIP1	Q9H074	479 aa	Known RBP	12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	OR10A4	Q9H209	315 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	CXXC4	Q9H2H0	198 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	BCO1	Q9HAY6	547 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	CTPS2	Q9NRF8	586 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	KLHL9	Q9P2J3	617 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	CHRNA9	Q9UGM1	479 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	PCDHB14	Q9Y5E9	798 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784	ROS1	P08922	2347 aa		12.34	□□□□□ -0.43
PKD1-231	ENST00000566784		A0A096LPI6	279 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	TMEM247	A6NEH6	219 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	DEFB108A	A8MXU0	73 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	DNPH1	O43598	174 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	CYTIP	O60759	359 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	YES1	P07947	543 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	BMP2	P12643	396 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	UQCRB	P14927	111 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	ENPP1	P22413	925 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	DIO1	P49895	249 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	ATP4B	P51164	291 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	CSNK2A1	P68400	391 aa	Predicted RBP	12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	ZSWIM7	Q19AV6	140 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	LIN52	Q52LA3	116 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	LRIF1	Q5T3J3	769 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	MRPL2	Q5T653	305 aa	Known RBP	12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	TFAP2E	Q6VUC0	442 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	STAC2	Q6ZMT1	411 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	ZNF440	Q8IYI8	595 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	SLC38A5	Q8WUX1	472 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	MBD6	Q96DN6	1003 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	PSD2	Q9BQI7	771 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	C12orf49	Q9H741	205 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	CCM2L	Q9NUG4	571 aa	Predicted RBP	12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	PLEKHA6	Q9Y2H5	1048 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	HDGFL3	Q9Y3E1	203 aa		12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	RAI1	Q7Z5J4	1906 aa	Predicted RBP	12.33	□□□□□ -0.44
PKD1-231	ENST00000566784	DSCAM	O60469	2012 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	IGHV3-15	A0A0B4J1V0	119 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784		A0A0G2JPF8	293 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784		A0A1W2PPR1	153 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	CDHR4	A6H8M9	788 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	CFAP73	A6NFT4	308 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	HNRNPCL2	B2RXH8	293 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	HNRNPCL3	B7ZW38	293 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	SULT2B1	O00204	365 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	CLIC1	O00299	241 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	SMAD9	O15198	467 aa	Known RBP	12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	SIAH2	O43255	324 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	HNRNPCL1	O60812	293 aa	Known RBP	12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	SASH3	O75995	380 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	PMS2P2	O95744	297 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	RAF1	P04049	648 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	BCHE	P06276	602 aa		12.32	□□□□□ -0.44
PKD1-231	ENST00000566784	HNRNPCL4	P0DMR1	293 aa		12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms