RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 ZNF461Q8TAF7 563 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 UBA3Q8TBC4 463 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 SCFD1Q8WVM8 642 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 TCEAL3Q969E4 200 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 RMDN1Q96DB5 314 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 PGAP3Q96FM1 320 aaPredicted RBP1.07□□□□□ -2.24
SMG1-212ENST00000566328 PAGE5Q96GU1 130 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 IFT74Q96LB3 600 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 CCDC43Q96MW1 224 aaKnown RBP1.07□□□□□ -2.24
SMG1-212ENST00000566328 SMIM14Q96QK8 99 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 SPAG8Q99932 426 aaPredicted RBP1.07□□□□□ -2.24
SMG1-212ENST00000566328 OR51J1Q9H342 316 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 GLIPR2Q9H4G4 154 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 SMYD3Q9H7B4 428 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 ACP6Q9NPH0 428 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 STOX2Q9P2F5 926 aaPredicted RBP1.07□□□□□ -2.24
SMG1-212ENST00000566328 HMGXB4Q9UGU5 601 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 NOL7Q9UMY1 257 aaKnown RBP1.07□□□□□ -2.24
SMG1-212ENST00000566328 ATG4BQ9Y4P1 393 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 LIPGQ9Y5X9 500 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 CACNA1BQ00975 2339 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 OTOGLQ3ZCN5 2332 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 ZFHX3Q15911 3703 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 CSMD2Q7Z408 3487 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 TANC1Q9C0D5 1861 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 NID2Q14112 1375 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 MIA3Q5JRA6 1907 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 THADAQ6YHU6 1953 aa1.07□□□□□ -2.24
SMG1-212ENST00000566328 URB1O60287 2271 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 LRRK1Q38SD2 2015 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 MDC1Q14676 2089 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 CRYBG3Q68DQ2 2970 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CSMD1Q96PZ7 3565 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 GOLGA6L7A0A1B0GV03 622 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ATP6AP2A0A1C7CYW4 349 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ARHGEF37A1IGU5 675 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ANXA2P2A6NMY6 339 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 F8VP50 259 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 K7EQS6 105 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ZNF263O14978 683 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 COCHO43405 550 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 KLRC4O43908 158 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 TSPAN2O60636 221 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 HUS1O60921 280 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 TBCAO75347 108 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 TOM1L1O75674 476 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CENPBP07199 599 aaPredicted RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 HSP90AA1P07900 732 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 PNMA6AP0CW24 399 aaPredicted RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 MCF2P10911 925 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CCDC130P13994 396 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 GCFC2P16383 781 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 HMGA1P17096 107 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 PSMC3P17980 439 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 LBPP18428 481 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ADRA2CP18825 462 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 TNNI1P19237 187 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CYP3A5P20815 502 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 BCKDHBP21953 392 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ADORA2BP29275 332 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PRPHP41219 470 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CASP2P42575 452 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 NAMPTP43490 491 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 NPBWR1P48145 328 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 GCLMP48507 274 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 NAGLUP54802 743 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 CLDN6P56747 220 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 MAP3K7CLP57077 242 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 STARD6P59095 220 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ASIC1P78348 528 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 HMGN5P82970 282 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 RBP5P82980 135 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 YWHAHQ04917 246 aaPredicted RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 BCL2L1Q07817 233 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 BFSP1Q12934 665 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PLD1Q13393 1074 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PNOCQ13519 176 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 MOBPQ13875 183 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ELAVL3Q14576 367 aaKnown RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 STK38Q15208 465 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 SEL1L2Q5TEA6 688 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 LIN9Q5TKA1 542 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PM20D1Q6GTS8 502 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 FAM71E1Q6IPT2 247 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 KDM7AQ6ZMT4 941 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 TPGS1Q6ZTW0 290 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 SPATA21Q7Z572 469 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ABHD12BQ7Z5M8 362 aaPredicted RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 GLRX5Q86SX6 157 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 TMEM25Q86YD3 366 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 MFSD6LQ8IWD5 586 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 UBALD2Q8IYN6 164 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 SIX6OS1Q8N1H7 587 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 PDCL2Q8N4E4 241 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ALLCQ8N6M5 410 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ZNF713Q8N859 430 aaPredicted RBP1.06□□□□□ -2.24
SMG1-212ENST00000566328 KIAA0895Q8NCT3 520 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 ERMNQ8TAM6 284 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 NEIL3Q8TAT5 605 aa1.06□□□□□ -2.24
SMG1-212ENST00000566328 FAM3CQ92520 227 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms