RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MANFP55145 182 aaKnown RBP7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 UBA52P62987 128 aaKnown RBP7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 TRA2BP62995 288 aaKnown RBP7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 IL13RA1P78552 427 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 MRPS35P82673 323 aaKnown RBP7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 BST1Q10588 318 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 IMPG1Q17R60 797 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 UGT3A2Q3SY77 523 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 SH2D4BQ5SQS7 431 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 KANK2Q63ZY3 851 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 OR7E24Q6IFN5 339 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 GALNT18Q6P9A2 607 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 ZCCHC23Q6ZST2 131 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 CCDC116Q8IYX3 515 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 ZNF786Q8N393 782 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 BPIFB2Q8N4F0 458 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 ZDHHC22Q8N966 263 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 MGARPQ8TDB4 240 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 CKAP2Q8WWK9 683 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 NEU4Q8WWR8 484 aaPredicted RBP7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 KLHL15Q96M94 604 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 LRRC37BQ96QE4 947 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 C1QTNF6Q9BXI9 259 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 RTN4RQ9BZR6 473 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 TMEM185BQ9H7F4 350 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 KLHL9Q9P2J3 617 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 PRSS50Q9UI38 385 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 ZDHHC2Q9UIJ5 367 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 SLC12A4Q9UP95 1085 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 TMED5Q9Y3A6 229 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 TIMM22Q9Y584 194 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 DNAJC15Q9Y5T4 150 aa7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 NUP214P35658 2090 aaPredicted RBP7.91□□□□□ -1.14
VPS9D1-205ENST00000565452 C7orf72A4D263 438 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 TRPC5OSA6NMA1 111 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 GJE1A6NN92 205 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 VSTM5A8MXK1 200 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ITM2AO43736 263 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ANGPTL1O95841 491 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 CHRNGP07510 517 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 MSMBP08118 114 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 PGCP20142 388 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 COX5AP20674 150 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 KHKP50053 298 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ZNF41P51814 821 aaPredicted RBP7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 MAPK12P53778 367 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 FOXA1P55317 472 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ACSM2AQ08AH3 577 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 MAD2L1Q13257 205 aaPredicted RBP7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 CCNIQ14094 377 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 LTB4RQ15722 352 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 SGO1Q5FBB7 561 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ACSM2BQ68CK6 577 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 NPSR1Q6W5P4 371 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 RBMS3Q6XE24 437 aaKnown RBP7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 FAM9CQ8IZT9 166 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 UBE2J2Q8N2K1 259 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 OR51F2Q8NH61 342 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ZNF675Q8TD23 568 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ACTRT2Q8TDY3 377 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 WDR60Q8WVS4 1066 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 ZBTB9Q96C00 473 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 KLHL29Q96CT2 875 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 PPP3R2Q96LZ3 170 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 RNF145Q96MT1 663 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 C7orf26Q96N11 449 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 MUS81Q96NY9 551 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 SORT1Q99523 831 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 SHCBP1LQ9BZQ2 653 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 BCO1Q9HAY6 547 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 FARSBQ9NSD9 589 aaKnown RBP7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 C1orf109Q9NX04 203 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 MCM8Q9UJA3 840 aa7.9□□□□□ -1.14
VPS9D1-205ENST00000565452 C9JVG2 144 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 HDAC3O15379 428 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 SEC22BO75396 215 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 RAD51DO75771 328 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 ANPEPP15144 967 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 PSMA4P25789 261 aaKnown RBP7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 MAPK1P28482 360 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 SFTPDP35247 375 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 EIF1P41567 113 aaKnown RBP7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 PRR5P85299 388 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 RIN1Q13671 783 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 ZNF628Q5EBL2 1059 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 SPDYAQ5MJ70 313 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 C1QTNF12Q5T7M4 302 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 FBXW9Q5XUX1 488 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 CLEC6AQ6EIG7 209 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 SPATA19Q7Z5L4 167 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 GALNT5Q7Z7M9 940 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 SAMD14Q8IZD0 417 aaPredicted RBP7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 NANPQ8TBE9 248 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 UBASH3BQ8TF42 649 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 TWIST2Q8WVJ9 160 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 ZNF775Q96BV0 537 aaPredicted RBP7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 ZNF681Q96N22 645 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 KCNA7Q96RP8 456 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 FAIM2Q9BWQ8 316 aa7.89□□□□□ -1.15
VPS9D1-205ENST00000565452 ACPTQ9BZG2 426 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms