RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 HSP90B2PQ58FF3 399 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 MRPL2Q5T653 305 aaKnown RBP10.99□□□□□ -0.65
SPG7-211ENST00000565370 RNF220Q5VTB9 566 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 AP1ARQ63HQ0 302 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 BLOC1S3Q6QNY0 202 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 BEND4Q6ZU67 534 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 HMGN2P46Q86SG4 172 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 BBS10Q8TAM1 723 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 ABHD3Q8WU67 409 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 ROBO4Q8WZ75 1007 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 NINJ1Q92982 152 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 AURKBQ96GD4 344 aaPredicted RBP10.99□□□□□ -0.65
SPG7-211ENST00000565370 TMEM19Q96HH6 336 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 PAIP1Q9H074 479 aaKnown RBP10.99□□□□□ -0.65
SPG7-211ENST00000565370 NPHS2Q9NP85 383 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 SLC6A13Q9NSD5 602 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 MRGBPQ9NV56 204 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 ITGB1BP2Q9UKP3 347 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 TESMINQ9Y4I5 508 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 DSPPQ9NZW4 1301 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 TACC2O95359 2948 aa10.99□□□□□ -0.65
SPG7-211ENST00000565370 PDZD2O15018 2839 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 A0A1W2PNR3 127 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 PRAMEF27A3QJZ7 478 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 CFAP73A6NFT4 308 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 CLDN24A6NM45 220 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 SULT2B1O00204 365 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 FAAHO00519 579 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 EDF1O60869 148 aaKnown RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 PRKD3O94806 890 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 CGAP01215 116 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 THBS1P07996 1170 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 TROVE2P10155 538 aaKnown RBP eCLIP10.98□□□□□ -0.65
SPG7-211ENST00000565370 PPP3CBP16298 524 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 NCF2P19878 526 aaPredicted RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 CCKARP32238 428 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 IDH2P48735 452 aaKnown RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 POLR2HP52434 150 aaKnown RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 MVDP53602 400 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 COPZ1P61923 177 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 FAM27E3Q08E93 113 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 RGNQ15493 299 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 AGKQ53H12 422 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 LRIF1Q5T3J3 769 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 GCNT6Q5T4J0 391 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 PRAMEF8Q5VWM4 474 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 PRAMEF7Q5VXH5 474 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 ZNF474Q6S9Z5 364 aaPredicted RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 OR52P1PQ8NH57 321 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 CNOT9Q92600 299 aaKnown RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 DDIT4LQ96D03 193 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 CCDC106Q9BWC9 280 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 KLHL4Q9C0H6 718 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 C12orf49Q9H741 205 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 A4GALTQ9NPC4 353 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 CTPS2Q9NRF8 586 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 PLSCR4Q9NRQ2 329 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 EMC3Q9P0I2 261 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 LEF1Q9UJU2 399 aaPredicted RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 PRDM4Q9UKN5 801 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 ZNF232Q9UNY5 417 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 ZNF443Q9Y2A4 671 aaPredicted RBP10.98□□□□□ -0.65
SPG7-211ENST00000565370 IFT52Q9Y366 437 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 HDGFL3Q9Y3E1 203 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 PCDHB14Q9Y5E9 798 aa10.98□□□□□ -0.65
SPG7-211ENST00000565370 CSMD2Q7Z408 3487 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 A0A0G2JND7 137 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 A0A0G2JPF8 293 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 FAM221AA4D161 298 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 EVPLLA8MZ36 301 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 HNRNPCL2B2RXH8 293 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 HNRNPCL3B7ZW38 293 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 ANGPT2O15123 496 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 DNPH1O43598 174 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 HNRNPCL1O60812 293 aaKnown RBP10.97□□□□□ -0.65
SPG7-211ENST00000565370 C1QCP02747 245 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 FESP07332 822 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 HNRNPCL4P0DMR1 293 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 CLK1P49759 484 aaKnown RBP10.97□□□□□ -0.65
SPG7-211ENST00000565370 DIO1P49895 249 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 MAP2K6P52564 334 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 ZNF836Q6ZNA1 936 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 ZNF550Q7Z398 422 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 CDC20BQ86Y33 519 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 SLC38A5Q8WUX1 472 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 THOC1Q96FV9 657 aaKnown RBP10.97□□□□□ -0.65
SPG7-211ENST00000565370 KLHL28Q9NXS3 571 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 DCTN4Q9UJW0 460 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 AKAP9Q99996 3911 aa10.97□□□□□ -0.65
SPG7-211ENST00000565370 IGHV3-15A0A0B4J1V0 119 aa10.96□□□□□ -0.65
SPG7-211ENST00000565370 A0A1W2PP18 115 aa10.96□□□□□ -0.65
SPG7-211ENST00000565370 CDHR4A6H8M9 788 aa10.96□□□□□ -0.65
SPG7-211ENST00000565370 AP3D1O14617 1153 aa10.96□□□□□ -0.65
SPG7-211ENST00000565370 EFNA2O43921 213 aa10.96□□□□□ -0.65
SPG7-211ENST00000565370 BCAS1O75363 584 aaPredicted RBP10.96□□□□□ -0.65
SPG7-211ENST00000565370 PMS2P2O95744 297 aa10.96□□□□□ -0.65
SPG7-211ENST00000565370 YES1P07947 543 aa10.96□□□□□ -0.65
SPG7-211ENST00000565370 TFPTP0C1Z6 253 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms