RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 PANX1Q96RD7 426 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 ZNF300Q96RE9 604 aaPredicted RBP8.91□□□□□ -0.98
CMTM3-209ENST00000565003 PIP5K1AQ99755 562 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 SMR3AQ99954 134 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 TMEM204Q9BSN7 226 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 CCDC106Q9BWC9 280 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 OR10A4Q9H209 315 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 SLC38A1Q9H2H9 487 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 FANCFQ9NPI8 374 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 CTPS2Q9NRF8 586 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 SLC6A13Q9NSD5 602 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 KLHL9Q9P2J3 617 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 SLC35A3Q9Y2D2 325 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 DSCAMO60469 2012 aa8.91□□□□□ -0.98
CMTM3-209ENST00000565003 MAP1AP78559 2803 aaPredicted RBP8.91□□□□□ -0.98
CMTM3-209ENST00000565003 NF1P21359 2839 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 CYTIPO60759 359 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 SMPD2O60906 423 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 FESP07332 822 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 FOSL1P15407 271 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 FPR1P21462 350 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 APOBEC1P41238 236 aaKnown RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 OR3A2P47893 321 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 SLC18A1P54219 525 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 NR1H2P55055 460 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 SLC9B1Q4ZJI4 515 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 PDCD4Q53EL6 469 aaKnown RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 SFRP5Q5T4F7 317 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ATG16L1Q676U5 607 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 NXNQ6DKJ4 435 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ABLIM2Q6H8Q1 611 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ALKBH2Q6NS38 261 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 DNAJC14Q6Y2X3 702 aaPredicted RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ZNF621Q6ZSS3 439 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 TMPPEQ6ZT21 453 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 GRINAQ7Z429 371 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 P3H2Q8IVL5 708 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 LRRC75A-AS1Q8N1F1 130 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 TRIML2Q8N7C3 387 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 STEAP2Q8NFT2 490 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ZNF563Q8TA94 476 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 SLC25A43Q8WUT9 341 aaPredicted RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 IGFBPL1Q8WX77 278 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 CNOT9Q92600 299 aaKnown RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ZNF75CPQ92670 426 aaPredicted RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ZNF775Q96BV0 537 aaPredicted RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 DNAJA3Q96EY1 480 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 PERPQ96FX8 193 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 POM121Q96HA1 1249 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 ARL5BQ96KC2 179 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 TRNT1Q96Q11 434 aaKnown RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 OR11A1Q9GZK7 315 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 MANSC1Q9H8J5 431 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 TMBIM4Q9HC24 238 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 EXOSC3Q9NQT5 275 aaKnown RBP8.9□□□□□ -0.98
CMTM3-209ENST00000565003 SERINC1Q9NRX5 453 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 NKIRAS1Q9NYS0 192 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 PRSS50Q9UI38 385 aa8.9□□□□□ -0.98
CMTM3-209ENST00000565003 AGAP5A6NIR3 686 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 SLCO1B7G3V0H7 640 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 SULT2B1O00204 365 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 AP3D1O14617 1153 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ADAP00813 363 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 IDO1P14902 403 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 HOXB4P17483 251 aaPredicted RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 RPS4Y1P22090 263 aaKnown RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 IL32P24001 234 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 IDH2P48735 452 aaKnown RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 MVDP53602 400 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 RASGEF1BQ0VAM2 473 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ITGADQ13349 1161 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 TAB1Q15750 504 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 MAPK11Q15759 364 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 MRPL2Q5T653 305 aaKnown RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 SEZ6L2Q6UXD5 910 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 LRRC74BQ6ZQY2 392 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ATG4DQ86TL0 474 aaPredicted RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ADGRG3Q86Y34 549 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ARFGAP2Q8N6H7 521 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 GLB1L3Q8NCI6 653 aaPredicted RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 OR9I1Q8NGQ6 314 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 RAB3IL1Q8TBN0 382 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 KISS1RQ969F8 398 aaPredicted RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ARL8AQ96BM9 186 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 C18orf12Q96KH6 178 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 OR52B2Q96RD2 323 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ZBTB18Q99592 522 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 TACO1Q9BSH4 297 aaKnown RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 HDHD5Q9BXW7 423 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 SDR39U1Q9NRG7 319 aaPredicted RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.89□□□□□ -0.99
CMTM3-209ENST00000565003 CHRNA9Q9UGM1 479 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 LIPT1Q9Y234 373 aa8.89□□□□□ -0.99
CMTM3-209ENST00000565003 USF3Q68DE3 2245 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 IGKV3D-15A0A087WSY6 115 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 ZNF724A8MTY0 619 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 RFXANKO14593 260 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 HS3ST1O14792 307 aa8.88□□□□□ -0.99
CMTM3-209ENST00000565003 KLF11O14901 512 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms