RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 WNT2BQ93097 391 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 KLHL15Q96M94 604 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 KCTD14Q9BQ13 255 aaPredicted RBP14.39□□□□□ -0.11
RAB40C-208ENST00000564703 ALG2Q9H553 416 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 SELENONQ9NZV5 590 aa14.39□□□□□ -0.11
RAB40C-208ENST00000564703 TMED7-TICAM2A0A0A6YYA0 188 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 SLC22A20A6NK97 555 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 TNFSF11O14788 317 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 ADAMDEC1O15204 470 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 EFNA2O43921 213 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 NTN1O95631 604 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 OPN1SWP03999 348 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 CCNA2P20248 432 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 IL11P20809 199 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 TACR3P29371 465 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 KDELR2P33947 212 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 RGS8P57771 180 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-208ENST00000564703 ADORA2A-AS1P86434 159 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 GTF2IRD2BQ6EKJ0 949 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 C8orf82Q6P1X6 216 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-208ENST00000564703 NCCRP1Q6ZVX7 275 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-208ENST00000564703 TRPM8Q7Z2W7 1104 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 GTF2IRD2Q86UP8 949 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 RANBP3LQ86VV4 465 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-208ENST00000564703 PGAM4Q8N0Y7 254 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 MARVELD2Q8N4S9 558 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 OR52E4Q8NGH9 312 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 OR2V1Q8NHB1 315 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 LZICQ8WZA0 190 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 UCN2Q96RP3 112 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 ZNF559Q9BR84 538 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 TRIM2Q9C040 744 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 TMEM27Q9HBJ8 222 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 CTPS2Q9NRF8 586 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 CHRNA9Q9UGM1 479 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 BAG5Q9UL15 447 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 MCTS1Q9ULC4 181 aaKnown RBP14.38□□□□□ -0.11
RAB40C-208ENST00000564703 TMED7Q9Y3B3 224 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 CHST2Q9Y4C5 530 aa14.38□□□□□ -0.11
RAB40C-208ENST00000564703 UBR5O95071 2799 aaPredicted RBP14.38□□□□□ -0.11
RAB40C-208ENST00000564703 GCN1Q92616 2671 aaKnown RBP14.38□□□□□ -0.11
RAB40C-208ENST00000564703 A0A0J9YW62 118 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 H0YC42 278 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 SYT5O00445 386 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 NME4O00746 187 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 FRS3O43559 492 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ADAM11O75078 769 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 GCM2O75603 506 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-208ENST00000564703 LGI1O95970 557 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 PRG2P13727 222 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 CALB2P22676 271 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 CHRNB4P30926 498 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 KCNJ5P48544 419 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 CLK1P49759 484 aaKnown RBP14.37□□□□□ -0.11
RAB40C-208ENST00000564703 GSK3BP49841 420 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 TPD52P55327 224 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-208ENST00000564703 SLC25A3Q00325 362 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 HOXC5Q00444 222 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 PLAURQ03405 335 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 PON3Q15166 354 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 DUSP7Q16829 419 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 LRRC23Q53EV4 343 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-208ENST00000564703 EEF1A1P5Q5VTE0 462 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 OR2A2Q6IF42 318 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 GGNQ86UU5 652 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ADGRG3Q86Y34 549 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 CCDC71Q8IV32 467 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-208ENST00000564703 OR10D3Q8NH80 312 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 RNF217Q8TC41 542 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ITLN2Q8WWU7 325 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-208ENST00000564703 FIG4Q92562 907 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ZNF524Q96C55 264 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 DDIT4LQ96D03 193 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ZFP3Q96NJ6 502 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 OR5B2Q96R09 309 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 CDRT15Q96T59 188 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ADAM19Q9H013 955 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ADPRHL2Q9NX46 363 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 TMEM181Q9P2C4 612 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 OSGIN1Q9UJX0 560 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 USP22Q9UPT9 525 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 RNF6Q9Y252 685 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 SLC9A8Q9Y2E8 581 aa14.37□□□□□ -0.11
RAB40C-208ENST00000564703 ARHGAP21Q5T5U3 1957 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 MBD3L4A6NDZ8 208 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 MBD3L3A6NE82 208 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 MBD3L5A6NJ08 208 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 CXCR6O00574 342 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 CXCL13O43927 109 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 RCBTB2O95199 551 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 FESP07332 822 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 FCGR2AP12318 317 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 CEACAM8P31997 349 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 DLX5P56178 289 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 CSNK2A1P68400 391 aaPredicted RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 GLIPR1L2Q4G1C9 344 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 SYT14P1Q58G82 188 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 SAMD4BQ5PRF9 694 aaKnown RBP14.36□□□□□ -0.11
RAB40C-208ENST00000564703 ADGRE4PQ86SQ3 457 aa14.36□□□□□ -0.11
RAB40C-208ENST00000564703 MCEMP1Q8IX19 187 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms