RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 LOC101059948A0A1B0GTJ6 334 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SYNDIG1LA6NDD5 238 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 EFCAB9A8MZ26 197 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 C17orf105B2RV13 164 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 M0R082 166 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DSCR3O14972 297 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PRODHO43272 600 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CHP2O43745 196 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 THY1P04216 161 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HMGN1P05114 100 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 KLK3P07288 261 aaPredicted RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HBQ1P09105 142 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MSL3P1P0C860 447 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 GKN3PP0CG01 181 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HSMCR30P0CW71 290 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 IFI30P13284 250 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PRG2P13727 222 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MYL12AP19105 171 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TCN2P20062 427 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 GRK5P34947 590 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DLSTP36957 453 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LIPAP38571 399 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ENTPD1P49961 510 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ATP12AP54707 1039 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 VBP1P61758 197 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LSM3P62310 102 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 RHAGQ02094 409 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DNASE1L3Q13609 305 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ERV3-1Q14264 604 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 FGFBP1Q14512 234 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NCF4Q15080 339 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MED22Q15528 200 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MOGQ16653 247 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MINDY4Q4G0A6 757 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SYT14P1Q58G82 188 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ARHGAP40Q5TG30 622 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 RNLSQ5VYX0 342 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 AP1ARQ63HQ0 302 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NPSR1Q6W5P4 371 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 QSOX2Q6ZRP7 698 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LINC00299Q6ZSB3 139 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 USP43Q70EL4 1123 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MED25Q71SY5 747 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZAR1Q86SH2 424 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MEX3DQ86XN8 651 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DTX1Q86Y01 620 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CROCCP3Q8IVE0 287 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZNF440Q8IYI8 595 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CDK20Q8IZL9 346 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 POGLUT1Q8NBL1 392 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SLC38A9Q8NBW4 561 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OR2T33Q8NG76 320 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OR8D4Q8NGM9 314 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 OR9Q1Q8NGQ5 310 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 C16orf52Q8NHV5 167 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NDNFQ8TB73 568 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 BRIX1Q8TDN6 353 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CT55Q8WUE5 264 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TMEM239Q8WW34 195 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CNOT9Q92600 299 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 RFKQ969G6 155 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZHX1-C8orf76Q96EF9 292 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ART5Q96L15 291 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LRR1Q96L50 414 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PTCHD1Q96NR3 888 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CCNL2Q96S94 520 aaPredicted RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PRSS27Q9BQR3 290 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DPH1Q9BZG8 443 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PNO1Q9NRX1 252 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LANCL2Q9NS86 450 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CHCHD3Q9NX63 227 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DNAJB12Q9NXW2 375 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 TAS2R16Q9NYV7 291 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 GPN3Q9UHW5 284 aaPredicted RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ZNF223Q9UK11 482 aaPredicted RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MRTO4Q9UKD2 239 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 PADI1Q9ULC6 663 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 DIMT1Q9UNQ2 313 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 SRPK3Q9UPE1 567 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MED31Q9Y3C7 131 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CLDN16Q9Y5I7 305 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MRPS18BQ9Y676 258 aaKnown RBP6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MAU2Q9Y6X3 613 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 ABCA12Q86UK0 2595 aa6.83□□□□□ -1.32
MAP1LC3B-205ENST00000564638 IGKV3D-11A0A0A0MRZ8 115 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 A0A0B4J2E0 115 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 A0A1B0GWA3 101 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 A0A1B0GX12 115 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 A0A1B0GX78 115 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 KDM4EB2RXH2 506 aaPredicted RBP6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 C9J4A7 227 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 NPIPB9F8W1W9 429 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HRKO00198 91 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 MEN1O00255 615 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 CCRL2O00421 344 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 HCN1O60741 890 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 RCBTB2O95199 551 aa6.82□□□□□ -1.32
MAP1LC3B-205ENST00000564638 LYPD3O95274 346 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms