RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 YTHDF3Q7Z739 585 aaKnown RBP11.25□□□□□ -0.61
KARS-204ENST00000564578 DHFR2Q86XF0 187 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 GALNT11Q8NCW6 608 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 LZICQ8WZA0 190 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 C3orf49Q96BT1 292 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 WDYHV1Q96HA8 205 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 HSH2DQ96JZ2 352 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 NSMCE2Q96MF7 247 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 MMADHCQ9H3L0 296 aaPredicted RBP11.25□□□□□ -0.61
KARS-204ENST00000564578 EVA1AQ9H8M9 152 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 CTPS2Q9NRF8 586 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 TESQ9UGI8 421 aaKnown RBP11.25□□□□□ -0.61
KARS-204ENST00000564578 SLC13A4Q9UKG4 626 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 POMPQ9Y244 141 aa11.25□□□□□ -0.61
KARS-204ENST00000564578 COL12A1Q99715 3063 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 H3BML4 177 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 LINC01387J3KSC0 135 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 FMO6PO60774 539 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 GMNNO75496 209 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 OPN1LWP04000 364 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 PEPDP12955 493 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 GP1BBP13224 206 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 CPN1P15169 458 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 ZNF708P17019 499 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 FUT4P22083 530 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 SHC1P29353 583 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 UQCRFS1P47985 274 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 SUCLG1P53597 346 aaKnown RBP11.24□□□□□ -0.61
KARS-204ENST00000564578 RAC1P63000 192 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 TRAP1Q12931 704 aaKnown RBP11.24□□□□□ -0.61
KARS-204ENST00000564578 C3AR1Q16581 482 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 IQCCQ4KMZ1 466 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 WBP2NLQ6ICG8 309 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 Q6ZPB1 254 aaPredicted RBP11.24□□□□□ -0.61
KARS-204ENST00000564578 FKBP9P1Q75LS8 142 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 GGNQ86UU5 652 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 LILRA2Q8N149 483 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 CADM2Q8N3J6 435 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 MCUR1Q96AQ8 359 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 C7orf34Q96L11 122 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 MCHR1Q99705 422 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 AMBRA1Q9C0C7 1298 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 PRDM14Q9GZV8 571 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 MUC13Q9H3R2 512 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 TMEM185BQ9H7F4 350 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 PNPLA3Q9NST1 481 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 CHCHD3Q9NX63 227 aaKnown RBP11.24□□□□□ -0.61
KARS-204ENST00000564578 RPS6KA6Q9UK32 745 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 SAMD4AQ9UPU9 718 aaKnown RBP11.24□□□□□ -0.61
KARS-204ENST00000564578 SLC9A8Q9Y2E8 581 aa11.24□□□□□ -0.61
KARS-204ENST00000564578 A0A1B0GWA3 101 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 FAM47E-STBD1D6RA91 191 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 SEMG1P04279 462 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 UQCRBP14927 111 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 GNLYP22749 145 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 ELK4P28324 431 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 APOBEC1P41238 236 aaKnown RBP11.23□□□□□ -0.61
KARS-204ENST00000564578 COPZ1P61923 177 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 OR1Q1Q15612 314 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 CTU2Q2VPK5 515 aaKnown RBP11.23□□□□□ -0.61
KARS-204ENST00000564578 ENTPD8Q5MY95 495 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 POMZP3Q6PJE2 187 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 ZNF605Q86T29 641 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 ATG4DQ86TL0 474 aaPredicted RBP11.23□□□□□ -0.61
KARS-204ENST00000564578 DOLPP1Q86YN1 238 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 OR5M9Q8NGP3 310 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 FAM57AQ8TBR7 257 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 ADAMTS16Q8TE57 1224 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 RELTQ969Z4 430 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 SARAFQ96BY9 339 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 PYURFQ96I23 114 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 ZNF559Q9BR84 538 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 ACAD8Q9UKU7 415 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 V9GYQ6 96 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 A0A0B4J2E0 115 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 A0A1B0GX12 115 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 FFAR1O14842 300 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 LYPD3O95274 346 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 POU3F2P20265 443 aaPredicted RBP11.23□□□□□ -0.61
KARS-204ENST00000564578 VLDLRP98155 873 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 KCNC4Q03721 635 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 IFI44LQ53G44 452 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 RANBP3LQ86VV4 465 aaPredicted RBP11.23□□□□□ -0.61
KARS-204ENST00000564578 GEMIN6Q8WXD5 167 aaKnown RBP11.23□□□□□ -0.61
KARS-204ENST00000564578 ADGRG7Q96K78 797 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 TRIM2Q9C040 744 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 CHRNA9Q9UGM1 479 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 TINAGQ9UJW2 476 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 AP4B1Q9Y6B7 739 aa11.23□□□□□ -0.61
KARS-204ENST00000564578 FASNP49327 2511 aaKnown RBP11.22□□□□□ -0.61
KARS-204ENST00000564578 TMED7-TICAM2A0A0A6YYA0 188 aa11.22□□□□□ -0.61
KARS-204ENST00000564578 ZC3H12DA2A288 527 aaKnown RBP11.22□□□□□ -0.61
KARS-204ENST00000564578 CPSF4LA6NMK7 179 aaKnown RBP11.22□□□□□ -0.61
KARS-204ENST00000564578 PYCARD-AS1I3L0S3 204 aa11.22□□□□□ -0.61
KARS-204ENST00000564578 BCKDKO14874 412 aa11.22□□□□□ -0.61
KARS-204ENST00000564578 ADAMDEC1O15204 470 aa11.22□□□□□ -0.61
KARS-204ENST00000564578 TPOP07202 933 aa11.22□□□□□ -0.61
KARS-204ENST00000564578 ABOP16442 354 aa11.22□□□□□ -0.61
KARS-204ENST00000564578 HTR3AP46098 478 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms