RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SYT14P1Q58G82 188 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 C6orf10Q5SRN2 563 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 MSANTD1Q6ZTZ1 278 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 BEND4Q6ZU67 534 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 STK32CQ86UX6 486 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 WDR60Q8WVS4 1066 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 DNAJA3Q96EY1 480 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 ITCHQ96J02 903 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 TPT1P8Q9HAU6 139 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 TCF7L2Q9NQB0 619 aa17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 ING1Q9UK53 422 aaPredicted RBP17.78■□□□□ 0.44
SHCBP1-203ENST00000564272 FAM234BA2RU67 622 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 POLR3GO15318 223 aaPredicted RBP17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 THBDP07204 575 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 FESP07332 822 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 ZCCHC18P0CG32 403 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 CRATP43155 626 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 IDH3AP50213 366 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 SLC2A7Q6PXP3 512 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 GRINAQ7Z429 371 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 CMIPQ8IY22 773 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 SLC25A43Q8WUT9 341 aaPredicted RBP17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 DYDC1Q8WWB3 177 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 MBD6Q96DN6 1003 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 HS3ST6Q96QI5 342 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 ALPK1Q96QP1 1244 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 PSD2Q9BQI7 771 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 P2RX2Q9UBL9 471 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 CHRNA9Q9UGM1 479 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 ITPR3Q14573 2671 aa17.77■□□□□ 0.44
SHCBP1-203ENST00000564272 BCHEP06276 602 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 YES1P07947 543 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 TFPIP10646 304 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 CCNA2P20248 432 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 LOXP28300 417 aaPredicted RBP17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 APOBEC1P41238 236 aaKnown RBP17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 IDH2P48735 452 aaKnown RBP17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 DIO1P49895 249 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 DSTNP60981 165 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 STX1BP61266 288 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 MRPL2Q5T653 305 aaKnown RBP17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 CXorf67Q86X51 503 aaPredicted RBP17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 SLC43A2Q8N370 569 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 GTF2H4Q92759 462 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 ZNF300Q96RE9 604 aaPredicted RBP17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 OR11A1Q9GZK7 315 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 ACTR6Q9GZN1 396 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 MTHFD2LQ9H903 347 aaPredicted RBP17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 GP6Q9HCN6 339 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 FANCFQ9NPI8 374 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 KLHL9Q9P2J3 617 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 FREM1Q5H8C1 2179 aa17.76■□□□□ 0.43
SHCBP1-203ENST00000564272 DSPPQ9NZW4 1301 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 SULT2B1O00204 365 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 CYTIPO60759 359 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 GCM2O75603 506 aaPredicted RBP17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 TGDSO95455 350 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 DBIP07108 87 aaKnown RBP17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 PPP3CBP16298 524 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 IL7RP16871 459 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 CD53P19397 219 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 MAGEA8P43361 318 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 RASGEF1BQ0VAM2 473 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 TSC22D1Q15714 1073 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 DEFB113Q30KQ7 82 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 RPS26P11Q5JNZ5 115 aaPredicted RBP17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 TMPPEQ6ZT21 453 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 HDXQ7Z353 690 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 VRK2Q86Y07 508 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 GABRG1Q8N1C3 465 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 GOLGA6L1Q8N7Z2 621 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 ZNF775Q96BV0 537 aaPredicted RBP17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 ARL5BQ96KC2 179 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 PAIP1Q9H074 479 aaKnown RBP17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 BCO1Q9HAY6 547 aa17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 SPIN1Q9Y657 262 aaPredicted RBP17.75■□□□□ 0.43
SHCBP1-203ENST00000564272 NR5A2O00482 541 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 TFPTP0C1Z6 253 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 H2AFXP16104 143 aaPredicted RBP17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 PSMB1P20618 241 aaKnown RBP17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 EDNRAP25101 427 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 MRPL19P49406 292 aaKnown RBP17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 AQP5P55064 265 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 CSNK2A1P68400 391 aaPredicted RBP17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 GNA13Q14344 377 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 ABLIM2Q6H8Q1 611 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 ZNF836Q6ZNA1 936 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 ADGRG3Q86Y34 549 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 WFDC8Q8IUA0 241 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 PEX5LQ8IYB4 626 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 SLC38A5Q8WUX1 472 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 TMEM19Q96HH6 336 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 TACO1Q9BSH4 297 aaKnown RBP17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 CCDC28BQ9BUN5 200 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 UBTD1Q9HAC8 227 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 RLIMQ9NVW2 624 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 GPR52Q9Y2T5 361 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 PCDHB14Q9Y5E9 798 aa17.74■□□□□ 0.43
SHCBP1-203ENST00000564272 PRR14LQ5THK1 2151 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms