RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 PLPPR5Q32ZL2 321 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 PODNL1Q6PEZ8 512 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 MBOAT2Q6ZWT7 520 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.54
CLK3-214ENST00000564096 TSPYL5Q86VY4 417 aaPredicted RBP11.65□□□□□ -0.54
CLK3-214ENST00000564096 CDK20Q8IZL9 346 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 AQP11Q8NBQ7 271 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 OR2M7Q8NG81 312 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 TMEM255BQ8WV15 326 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 SCMH1Q96GD3 660 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 RDH12Q96NR8 316 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 PRR14Q9BWN1 585 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 KLHL1Q9NR64 748 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 SERINC1Q9NRX5 453 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 TUBA8Q9NY65 449 aaPredicted RBP11.65□□□□□ -0.54
CLK3-214ENST00000564096 USE1Q9NZ43 259 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 FBXL2Q9UKC9 423 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 MGAT4BQ9UQ53 548 aa11.65□□□□□ -0.54
CLK3-214ENST00000564096 A0A087WUJ7 227 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 A0A0G2JMM0 328 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 A0A1W2PPB8 328 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 A0A1W2PRS3 328 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 LRRC3CA6NJW4 275 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 KIR3DP1A8MWS1 328 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 PDLIM1O00151 329 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 HK1P19367 917 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 GSTM3P21266 225 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 MST1P26927 711 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 GDF1P27539 372 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 ADH6P28332 368 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 MEOX1P50221 254 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 PPP2R2BQ00005 443 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 SELENBP1Q13228 472 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 LAPTM4AQ15012 233 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 TOMM20Q15388 145 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 TAF11Q15544 211 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 GLYR1Q49A26 553 aaPredicted RBP11.64□□□□□ -0.55
CLK3-214ENST00000564096 RAET1LQ5VY80 246 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 PPP4R4Q6NUP7 873 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 ARSKQ6UWY0 536 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 IZUMO2Q6UXV1 221 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 GALNTL5Q7Z4T8 443 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 SLC22A16Q86VW1 577 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 NKAIN4Q8IVV8 208 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 SULF2Q8IWU5 870 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 OR9Q2Q8NGE9 314 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 MAGEE2Q8TD90 523 aaPredicted RBP11.64□□□□□ -0.55
CLK3-214ENST00000564096 SLC25A43Q8WUT9 341 aaPredicted RBP11.64□□□□□ -0.55
CLK3-214ENST00000564096 NRG4Q8WWG1 115 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 NTNG2Q96CW9 530 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 PIGQQ9BRB3 760 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 FUZQ9BT04 418 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 TMEM43Q9BTV4 400 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 ZNF426Q9BUY5 554 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 ZNF703Q9H7S9 590 aaPredicted RBP11.64□□□□□ -0.55
CLK3-214ENST00000564096 COQ10BQ9H8M1 238 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 PROK2Q9HC23 129 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 KRT84Q9NSB2 600 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 DEPPQ9NTK1 212 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 SMPD3Q9NY59 655 aaPredicted RBP11.64□□□□□ -0.55
CLK3-214ENST00000564096 CHRNA9Q9UGM1 479 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 POFUT2Q9Y2G5 429 aa11.64□□□□□ -0.55
CLK3-214ENST00000564096 A0A087WUU8 490 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 TMED7-TICAM2A0A0A6YYA0 188 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 H0YJX3 145 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 KPNA4O00629 521 aaPredicted RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 SOCS2O14508 198 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 SUSD5O60279 629 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 IGF2P01344 180 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 THY1P04216 161 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 ALPLP05186 524 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 FPR3P25089 353 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 FKBP2P26885 142 aaKnown RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 ALDH6A1Q02252 535 aaKnown RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 ZNF169Q14929 603 aaPredicted RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 SEC23BQ15437 767 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 TOMM34Q15785 309 aaPredicted RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 INAQ16352 499 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 TBR1Q16650 682 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 SLC25A53Q5H9E4 307 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 PGBD2Q6P3X8 592 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 FAHD1Q6P587 224 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 POMZP3Q6PJE2 187 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 TMEM179BQ7Z7N9 219 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 NRMQ8IXM6 262 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 HS3ST5Q8IZT8 346 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 GTPBP8Q8N3Z3 284 aaPredicted RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 GALNT4Q8N4A0 578 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 OR14L1PQ8NHC6 308 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 DDIT4LQ96D03 193 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 GNRHR2Q96P88 292 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 FEVQ99581 238 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 ZNF184Q99676 751 aaPredicted RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 PRSS27Q9BQR3 290 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 ARHGAP9Q9BRR9 750 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 TACO1Q9BSH4 297 aaKnown RBP11.63□□□□□ -0.55
CLK3-214ENST00000564096 DGCR6LQ9BY27 220 aa11.63□□□□□ -0.55
CLK3-214ENST00000564096 TTTY12Q9BZ98 90 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms