RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 A0A087WWV3 80 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 LRP5LA4QPB2 252 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 H3BTX0 84 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 IMPA2O14732 288 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 FPGTO14772 594 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 TIMM23O14925 209 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 ARPC1BO15143 372 aaKnown RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 MPPED1O15442 326 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 KLRC4O43908 158 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 TSPAN2O60636 221 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 NDUFS7O75251 213 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 LRCH4O75427 683 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 PDE5AO76074 875 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 OAZ2O95190 189 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 PAPSS2O95340 614 aaPredicted RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 UBCP0CG48 685 aaKnown RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 CXCL8P10145 99 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 ARSBP15848 533 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 CBLP22681 906 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 STOMP27105 288 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 HOXA9P31269 272 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 HPCAL1P37235 193 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 RGRP47804 291 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 CDC34P49427 236 aaPredicted RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 CLDN17P56750 224 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 TSPAN5P62079 268 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 CYP24A1Q07973 514 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 C1orf61Q13536 156 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 TUBA3CQ13748 450 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 HNF4GQ14541 408 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 OR1C1Q15619 314 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 ZSCAN26Q16670 478 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 ACSF3Q4G176 576 aaPredicted RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 EOGTQ5NDL2 527 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF776Q68DI1 518 aaPredicted RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 DPY19L2P2Q6ZN68 376 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 MRPL21Q7Z2W9 205 aaKnown RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 COX8CQ7Z4L0 72 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 P4HA3Q7Z4N8 544 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 SNX20Q7Z614 316 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC39A11Q8N1S5 342 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 ZNF557Q8N988 423 aaPredicted RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 PPP4R1Q8TF05 950 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 CD101Q93033 1021 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 C18orf25Q96B23 403 aaPredicted RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 MAP3K3Q99759 626 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 AIFM2Q9BRQ8 373 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 TUBGCP2Q9BSJ2 902 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 CHID1Q9BWS9 393 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 POLDIP3Q9BY77 421 aaKnown RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 NXF3Q9H4D5 531 aaKnown RBP4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 DMAC2Q9NW81 257 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 NKIRAS1Q9NYS0 192 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 MBD2Q9UBB5 411 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 SLC12A6Q9UHW9 1150 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 MYO6Q9UM54 1294 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 STARD10Q9Y365 291 aa4.63□□□□□ -1.67
VPS35P1-201ENST00000563400 TEX13DA0A0J9YY54 714 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 A0A1B0GW15 77 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GAGE12BA1L429 117 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GOLGA8IPA6NC78 632 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GAGE12HA6NDE8 117 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SMLR1H3BR10 107 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PIRO00625 290 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 DVL1O14640 695 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TOR1AO14656 332 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SH2D1BO14796 132 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CLOCKO15516 846 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 B4GALT5O43286 388 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 COCHO43405 550 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TPST2O60704 377 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 FAM20BO75063 409 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CDC123O75794 336 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 RBBP9O75884 186 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 IGF1P05019 195 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SERPIND1P05546 499 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PAEPP09466 180 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CT62P0C5K7 136 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PNMA6AP0CW24 399 aaPredicted RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MMP11P24347 488 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CFHR2P36980 270 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 FOLR3P41439 243 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 SGSHP51688 502 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 RAG2P55895 527 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 RPS4XP62701 263 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CSNK1G2P78368 415 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 CX3CL1P78423 397 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 DEFB103AP81534 67 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 LGALS3BPQ08380 585 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TRAP1Q12931 704 aaKnown RBP4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 TAF10Q12962 218 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GPR17Q13304 367 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 MADCAM1Q13477 382 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GPR50Q13585 617 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 ZBTB6Q15916 424 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PSMD5Q16401 504 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PHKG1Q16816 387 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 GPR33Q49SQ1 333 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 PPM1LQ5SGD2 360 aa4.62□□□□□ -1.67
VPS35P1-201ENST00000563400 C9orf57Q5W0N0 161 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms