RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 STX16-NPEPL1H3BU86 382 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 SCDO00767 359 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 STX16O14662 325 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 KLF11O14901 512 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 DNAJA2O60884 412 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 PRSS23O95084 383 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 IGLV1-44P01699 117 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 C2P06681 752 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 CECR9P0C854 216 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 SAGP10523 405 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 HSD3B1P14060 373 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 DDCP20711 480 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 COL8A2P25067 703 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 HSD3B2P26439 372 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 LCN1P31025 176 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 TIA1P31483 386 aaKnown RBP eCLIP6.65□□□□□ -1.349e-7■■■□□ 15.9
HERPUD1-206ENST00000563343 SPRP35270 261 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 THBS4P35443 961 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 GPR6P46095 362 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 WDR4P57081 412 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 IL1RL1Q01638 556 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 POU3F1Q03052 451 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 ADRM1Q16186 407 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 DUSP5Q16690 384 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 MSMPQ1L6U9 139 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 HIKESHIQ53FT3 197 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 KLHL26Q53HC5 615 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 GRTP1Q5TC63 336 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 TSPO2Q5TGU0 170 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 FAM71E1Q6IPT2 247 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 C3orf33Q6P1S2 294 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 VHLLQ6RSH7 139 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 TMPPEQ6ZT21 453 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 RHOUQ7L0Q8 258 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 DOK3Q7L591 496 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 MTERF4Q7Z6M4 381 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 MTDHQ86UE4 582 aaKnown RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 MYPOPQ86VE0 399 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 ZBED8Q8IZ13 594 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 CDK20Q8IZL9 346 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 BPIFB2Q8N4F0 458 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 CDRT4Q8N9R6 151 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 SYT14Q8NB59 555 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 SLC16A11Q8NCK7 471 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 NUP37Q8NFH4 326 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 PHOSPHO1Q8TCT1 267 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 ACTRT1Q8TDG2 376 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 ZNF483Q8TF39 744 aaPredicted RBP6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 C22orf15Q8WYQ4 148 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 CDKL2Q92772 493 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 YIPF5Q969M3 257 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 PHF21BQ96EK2 531 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 PBKQ96KB5 322 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 EBPLQ9BY08 206 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 ACPTQ9BZG2 426 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 TPK1Q9H3S4 243 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 NTN4Q9HB63 628 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 SIRT5Q9NXA8 310 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 TXNDC16Q9P2K2 825 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 OPN4Q9UHM6 478 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 ZDHHC2Q9UIJ5 367 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 CARD8Q9Y2G2 431 aa6.65□□□□□ -1.34
HERPUD1-206ENST00000563343 GNG14A0A1W2PPG7 69 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 MANBAO00462 879 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 GPR171O14626 319 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 MRPL33O75394 65 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 DEAF1O75398 565 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 RP2O75695 350 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 OR4F21O95013 312 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 KLHL2O95198 593 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 NUDT14O95848 222 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 WNT11O96014 354 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 CRYAAP02489 173 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 HPXP02790 462 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 PRPS2P11908 318 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 TSPAN8P19075 237 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 NPR2P20594 1047 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 MDKP21741 143 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 SLC1A3P43003 542 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 GSTM5P46439 218 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 HTR6P50406 440 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 RNF144AP50876 292 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 C2orf80Q0P641 193 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 FAM83EQ2M2I3 478 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 C3orf36Q3SXR2 165 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 SPIN4Q56A73 249 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 ANKRD16Q6P6B7 361 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF551Q7Z340 670 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 C1QL4Q86Z23 238 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 CCDC103Q8IW40 242 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 SIGLECL1Q8N7X8 197 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 CEP70Q8NHQ1 597 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 FBXO30Q8TB52 745 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 NANPQ8TBE9 248 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 CKAP2Q8WWK9 683 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 ZNF48Q96MX3 618 aaPredicted RBP6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 DUX5Q96PT3 197 aa6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 QRSL1Q9H0R6 528 aaKnown RBP6.64□□□□□ -1.35
HERPUD1-206ENST00000563343 MMP27Q9H306 513 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms