RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 AIFM1O95831 613 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 GBAP04062 536 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 CLPSP04118 112 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 KLK1P06870 262 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 FAM58BPP0C7Q3 252 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 LINC00032P0C843 101 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 TFPIP10646 304 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 RNH1P13489 461 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 NR1D1P20393 614 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 MAOAP21397 527 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 PPP2R1BP30154 601 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 HMOX2P30519 316 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 TIA1P31483 386 aaKnown RBP eCLIP4.16□□□□□ -1.74
SMG1-206ENST00000562668 HPDP32754 393 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 SSR2P43308 183 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 RPL14P50914 215 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 EMP2P54851 167 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 UCNP55089 124 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 HSD17B7P56937 341 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 RPS15P62841 145 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 TNFRSF17Q02223 184 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 IFT88Q13099 833 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 STX3Q13277 289 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 SLAMF1Q13291 335 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 CEBPEQ15744 281 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 PDCD2Q16342 344 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 TIGD6Q17RP2 521 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 RFTN2Q52LD8 501 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 CFAP157Q5JU67 520 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 HHATQ5VTY9 493 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 TTC19Q6DKK2 380 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 FAM71E1Q6IPT2 247 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 CGB2Q6NT52 195 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ADAM5Q6NVV9 412 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 C19orf48Q6RUI8 117 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ANKRD37Q7Z713 158 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 GPR180Q86V85 440 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 APLFQ8IW19 511 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 TMEM170AQ8WVE7 144 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 THAP4Q8WY91 577 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 PSMF1Q92530 271 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 TBC1D20Q96BZ9 403 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 C8orf44Q96CB5 159 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 RNFT2Q96EX2 444 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 METTL2AQ96IZ6 378 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 EGLN2Q96KS0 407 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 MAGEB18Q96M61 343 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 C7orf26Q96N11 449 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ZNF681Q96N22 645 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 NPAS2Q99743 824 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 SLC7A5P2Q9GIP4 190 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ROGDIQ9GZN7 287 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 EML4Q9HC35 981 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 SLCO1B3Q9NPD5 702 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 P4HTMQ9NXG6 502 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 NKIRAS1Q9NYS0 192 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ZNF224Q9NZL3 707 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 C3orf18Q9UK00 162 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 ZNF223Q9UK11 482 aaPredicted RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 NXT1Q9UKK6 140 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 PPIEQ9UNP9 301 aaKnown RBP4.16□□□□□ -1.74
SMG1-206ENST00000562668 DLGAP4Q9Y2H0 992 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 EPG5Q9HCE0 2579 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 NBEAQ8NFP9 2946 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 DOCK10Q96BY6 2186 aa4.16□□□□□ -1.74
SMG1-206ENST00000562668 IGSF10Q6WRI0 2623 aa4.15□□□□□ -1.74
SMG1-206ENST00000562668 ATMQ13315 3056 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ATP6AP2A0A1C7CYW4 349 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 hDV102S1A0JD36 115 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 HNRNPCL2B2RXH8 293 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 K7EM74 188 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 SLC28A1O00337 649 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 EBAG9O00559 213 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PGRMC2O15173 223 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PCDH7O60245 1069 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 TBX19O60806 448 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 B4GALT2O60909 372 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ATP6AP2O75787 350 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 HSPA4LO95757 839 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 IGHEP01854 428 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 IL3P08700 152 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PRKAR1AP10644 381 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 BCKDHAP12694 445 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 SDC1P18827 310 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 S1PR1P21453 382 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 CPN2P22792 545 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 OTX2P32243 289 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 ARL1P40616 181 aaPredicted RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 ZFP36L2P47974 494 aaKnown RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 RAP1GDS1P52306 607 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 TRA2BP62995 288 aaKnown RBP4.15□□□□□ -1.75
SMG1-206ENST00000562668 PHEXP78562 749 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 MC1RQ01726 317 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 TGM3Q08188 693 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 CHAF1BQ13112 559 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 PDE7AQ13946 482 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 SMU1Q2TAY7 513 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 SPIN4Q56A73 249 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 DCAF10Q5QP82 559 aa4.15□□□□□ -1.75
SMG1-206ENST00000562668 C6orf136Q5SQH8 315 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms