RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 PRSS50Q9UI38 385 aa8.44□□□□□ -1.06
NSMCE1-203ENST00000562039 TMEM72A0PK05 275 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 FAM234BA2RU67 622 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 GJE1A6NN92 205 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 DEFB108AA8MXU0 73 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 ZNF814B7Z6K7 855 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 SULT2B1O00204 365 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 SMAD9O15198 467 aaKnown RBP8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 RAMP1O60894 148 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 SASH3O75995 380 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PRKD3O94806 890 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 SOX30O94993 753 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PLAUP00749 431 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PRG2P13727 222 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 H2AFXP16104 143 aaPredicted RBP8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 IL7RP16871 459 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 ADH6P28332 368 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 DIO1P49895 249 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 ANXA11P50995 505 aaKnown RBP8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 MVDP53602 400 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 OR2B6P58173 313 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PPP2R2AP63151 447 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 HOXC5Q00444 222 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 BNIP2Q12982 314 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 AGKQ53H12 422 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 SYT14P1Q58G82 188 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 SLC25A53Q5H9E4 307 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PAGE3Q5JUK9 113 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 C3orf33Q6P1S2 294 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PAMR1Q6UXH9 720 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 STAC2Q6ZMT1 411 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 ATG4DQ86TL0 474 aaPredicted RBP8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 FUNDC1Q8IVP5 155 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 C10orf111Q8N326 155 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 FAM71CQ8NEG0 241 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 OR52P1PQ8NH57 321 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 TMEM234Q8WY98 164 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 ST8SIA1Q92185 356 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 TMEM19Q96HH6 336 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 TRNT1Q96Q11 434 aaKnown RBP8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 ACTR6Q9GZN1 396 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PAIP1Q9H074 479 aaKnown RBP8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 RMND5AQ9H871 391 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 TIGARQ9NQ88 270 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 POLE3Q9NRF9 147 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 ELOVL5Q9NYP7 299 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 P2RX2Q9UBL9 471 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 DCTN4Q9UJW0 460 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 SLC35A3Q9Y2D2 325 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 PCDHB14Q9Y5E9 798 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 HIVEP1P15822 2718 aa8.43□□□□□ -1.06
NSMCE1-203ENST00000562039 TMED7-TICAM2A0A0A6YYA0 188 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ZC3H12DA2A288 527 aaKnown RBP8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 AGAP5A6NIR3 686 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 CLIC1O00299 241 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ATE1O95260 518 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ADAP00813 363 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 RAF1P04049 648 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 NID1P14543 1247 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 NCF2P19878 526 aaPredicted RBP8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 TACR3P29371 465 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 RASGEF1BQ0VAM2 473 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 CAPRIN1Q14444 709 aaKnown RBP8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 GTF2IRD2BQ6EKJ0 949 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 TFAP2EQ6VUC0 442 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 TMPPEQ6ZT21 453 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 GTF2IRD2Q86UP8 949 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 STK32CQ86UX6 486 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ADGRG3Q86Y34 549 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 CCDC103Q8IW40 242 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 PEX5LQ8IYB4 626 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 CLIP4Q8N3C7 705 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 NFKBIDQ8NI38 313 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 SLC38A5Q8WUX1 472 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 CKAP2Q8WWK9 683 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 GTF2H4Q92759 462 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 S100PBPQ96BU1 408 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 SPDL1Q96EA4 605 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 PSD2Q9BQI7 771 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 CCDC106Q9BWC9 280 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 MTHFD2LQ9H903 347 aaPredicted RBP8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 NPHS2Q9NP85 383 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ARGLU1Q9NWB6 273 aaPredicted RBP8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ZNF226Q9NYT6 803 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 SLC25A37Q9NYZ2 338 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 CHRNA9Q9UGM1 479 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 OSGIN1Q9UJX0 560 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ING1Q9UK53 422 aaPredicted RBP8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 LIPT1Q9Y234 373 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 ZNF443Q9Y2A4 671 aaPredicted RBP8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 TMED7Q9Y3B3 224 aa8.42□□□□□ -1.06
NSMCE1-203ENST00000562039 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 CFAP73A6NFT4 308 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 HMGB1P1B2RPK0 211 aaPredicted RBP8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 DNAJA2O60884 412 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 LYZL6O75951 148 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 DBIP07108 87 aaKnown RBP8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 YES1P07947 543 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 TFPTP0C1Z6 253 aa8.41□□□□□ -1.06
NSMCE1-203ENST00000562039 PABPC4LP0CB38 370 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms