RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 EDNRAP25101 427 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 PTAFRP25105 342 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 HPCAL1P37235 193 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 NUDT6P53370 316 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 IRX1P78414 480 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 VLDLRP98155 873 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 CBFBQ13951 182 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 PDK3Q15120 406 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 QPRTQ15274 297 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 TMEM249Q2WGJ8 235 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 NDUFAF6Q330K2 333 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 C11orf71Q6IPW1 123 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 C3orf33Q6P1S2 294 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 CLEC2AQ6UVW9 174 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 TMEM108Q6UXF1 575 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 CPLX4Q7Z7G2 160 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 GALNT5Q7Z7M9 940 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF100Q8IYN0 542 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF433Q8N7K0 673 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 CCDC63Q8NA47 563 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 CKAP2Q8WWK9 683 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 OR5P2Q8WZ92 322 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 MAGEB18Q96M61 343 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF317Q96PQ6 595 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF300Q96RE9 604 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 DHRS9Q9BPW9 319 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 CACNG6Q9BXT2 260 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 FIS1Q9Y3D6 152 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 KCNE3Q9Y6H6 103 aa10.44□□□□□ -0.74
CARMIL3-204ENST00000561354 IGKV3D-15A0A087WSY6 115 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 FAM234BA2RU67 622 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 C9JVG2 144 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 E7EQL1 145 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 H6PDO95479 791 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 LAMP1P11279 417 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 UBL4AP11441 157 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 SLC25A16P16260 332 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 PTNP21246 168 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 DRD4P21917 467 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 MAPK1P28482 360 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 DIO1P49895 249 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 RNF144AP50876 292 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 TP53BP2Q13625 1128 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 LSM12Q3MHD2 195 aaKnown RBP10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 UGT3A2Q3SY77 523 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 GALNTL6Q49A17 601 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 TIGD2Q4W5G0 525 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 FBXW9Q5XUX1 488 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 TMPPEQ6ZT21 453 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF614Q8N883 585 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 ANKS4BQ8N8V4 417 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 OR7A2PQ8NGA2 310 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 RFWD2Q8NHY2 731 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 SFXN5Q8TD22 340 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 ST8SIA1Q92185 356 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF775Q96BV0 537 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 MOAP1Q96BY2 351 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 COQ8BQ96D53 544 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 OR5B2Q96R09 309 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 SDF2Q99470 211 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 GATA5Q9BWX5 397 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 NMUR2Q9GZQ4 415 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 LAT2Q9GZY6 243 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 SERINC1Q9NRX5 453 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 MKS1Q9NXB0 559 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 MID2Q9UJV3 735 aa10.43□□□□□ -0.74
CARMIL3-204ENST00000561354 ALPK2Q86TB3 2170 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 MXRA5Q9NR99 2828 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SERINC4A6NH21 518 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 H7C417 338 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 COPEO14579 308 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 TYROBPO43914 113 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 TRIM13O60858 407 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 LYPLA1O75608 230 aaPredicted RBP10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 DHRS4L1P0CG22 281 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 CD40P25942 277 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 THBS2P35442 1172 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 CCR4P51679 360 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SEC24CP53992 1094 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SESN3P58005 492 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 CSNK2A1P68400 391 aaPredicted RBP10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SKP2Q13309 424 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 RAB35Q15286 201 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF141Q15928 474 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SPDYE7PQ495Y7 208 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 ZNF544Q6NX49 715 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 BHLHB9Q6PI77 547 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SLC22A25Q6T423 547 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 KLHL17Q6TDP4 642 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 MTDHQ86UE4 582 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 C10orf107Q8IVU9 208 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 DDIASQ8IXT1 998 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 FBXL14Q8N1E6 418 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 MUC15Q8N387 334 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 TMCO5AQ8N6Q1 288 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 SLC25A43Q8WUT9 341 aaPredicted RBP10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 TWIST2Q8WVJ9 160 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 TMEM234Q8WY98 164 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 PPP3R2Q96LZ3 170 aa10.42□□□□□ -0.74
CARMIL3-204ENST00000561354 OR7D2Q96RA2 312 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms