RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	EPHA3	P29320	983 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	KCNJ5	P48544	419 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	PCYT1A	P49585	367 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	SUMO3	P55854	103 aa	Predicted RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	RIPPLY3	P57055	190 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	UFM1	P61960	85 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	EEF1A1	P68104	462 aa	Known RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	KEAP1	Q14145	624 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	FGFBP1	Q14512	234 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	TSC22D1	Q15714	1073 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	ZNF141	Q15928	474 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	TMEM176B	Q3YBM2	270 aa	Predicted RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	FAM174B	Q3ZCQ3	159 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	SLC25A53	Q5H9E4	307 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	EEF1A1P5	Q5VTE0	462 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	TYW3	Q6IPR3	259 aa	Known RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	HEPHL1	Q6MZM0	1159 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	OGFOD2	Q6N063	350 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	FRRS1	Q6ZNA5	592 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	NUFIP2	Q7Z417	695 aa	Known RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	ZNF527	Q8NB42	609 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	FAM71C	Q8NEG0	241 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	ATP6V1C2	Q8NEY4	427 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	ZFP90	Q8TF47	636 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	OSTF1	Q92882	214 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	ZG16B	Q96DA0	208 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	SLC35A5	Q9BS91	424 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	INPP5K	Q9BT40	448 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	THUMPD3	Q9BV44	507 aa	Known RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	PRRG4	Q9BZD6	226 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	NMUR2	Q9GZQ4	415 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	HOXD1	Q9GZZ0	328 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	GSX1	Q9H4S2	264 aa	Predicted RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	WDR55	Q9H6Y2	383 aa	Predicted RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	PLSCR4	Q9NRQ2	329 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	SLC6A13	Q9NSD5	602 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	AIG1	Q9NVV5	245 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	ELOVL5	Q9NYP7	299 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	NDRG3	Q9UGV2	375 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	MCTS1	Q9ULC4	181 aa	Known RBP	6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	EMC9	Q9Y3B6	208 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	CAD	P27708	2225 aa		6.59	□□□□□ -1.35
ZEB1-223	ENST00000561304	PRSS51	A0A1B0GVH4	220 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	MEGF11	A6BM72	1044 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	GTPBP1	O00178	669 aa	Known RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	HMGN4	O00479	90 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	KLF4	O43474	513 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	DNAJA2	O60884	412 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	STX11	O75558	287 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	GCM2	O75603	506 aa	Predicted RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CYP7B1	O75881	506 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	SYNGR4	O95473	234 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	PLAU	P00749	431 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CHRM4	P08173	479 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	UBTFL6	P0CB48	400 aa	Predicted RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	KIT	P10721	976 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CD99	P14209	185 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	ENPP1	P22413	925 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	UQCRC2	P22695	453 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	PGM1	P36871	562 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	EIF1	P41567	113 aa	Known RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CTBP2	P56545	445 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CARD18	P57730	90 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	MAGOH	P61326	146 aa	Known RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	SELENBP1	Q13228	472 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CBFB	Q13951	182 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	MAPK11	Q15759	364 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	TIGD2	Q4W5G0	525 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	HHAT	Q5VTY9	493 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	TFAP2E	Q6VUC0	442 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	C16orf62	Q7Z3J2	963 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	ATG4D	Q86TL0	474 aa	Predicted RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	RNF130	Q86XS8	419 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	TUSC5	Q8IXB3	177 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	ANKFN1	Q8N957	763 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	OR5W2	Q8NH69	310 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	PNPT1	Q8TCS8	783 aa	Known RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	UBASH3B	Q8TF42	649 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CPNE4	Q96A23	557 aa	Predicted RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	ROPN1L	Q96C74	230 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	TLCD1	Q96CP7	247 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	NEURL3	Q96EH8	262 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	DNAJA3	Q96EY1	480 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	MRGPRX4	Q96LA9	322 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	CCDC115	Q96NT0	180 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	SLC39A3	Q9BRY0	314 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	LAT2	Q9GZY6	243 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	UBTD1	Q9HAC8	227 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	NPHS2	Q9NP85	383 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	PAQR5	Q9NXK6	330 aa	Predicted RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	KLHL13	Q9P2N7	655 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	GPR45	Q9Y5Y3	372 aa		6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	HEATR1	Q9H583	2144 aa	Known RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	NSD1	Q96L73	2696 aa	Predicted RBP	6.58	□□□□□ -1.36
ZEB1-223	ENST00000561304	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	6.57	□□□□□ -1.36
ZEB1-223	ENST00000561304		H3BNH8	94 aa		6.57	□□□□□ -1.36
ZEB1-223	ENST00000561304	AP3D1	O14617	1153 aa		6.57	□□□□□ -1.36
ZEB1-223	ENST00000561304	CASK	O14936	926 aa		6.57	□□□□□ -1.36
ZEB1-223	ENST00000561304	SMAD9	O15198	467 aa	Known RBP	6.57	□□□□□ -1.36
ZEB1-223	ENST00000561304	EIF4E2	O60573	245 aa	Known RBP	6.57	□□□□□ -1.36

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