RNA–Protein interactions for RNA: ENST00000560982.5

USP8-215, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 3

Gene USP8, Length 410 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-215ENST00000560982 GTPBP3Q969Y2 492 aaKnown RBP12.37□□□□□ -0.43
USP8-215ENST00000560982 TRMT61AQ96FX7 289 aaKnown RBP12.37□□□□□ -0.43
USP8-215ENST00000560982 ACER3Q9NUN7 267 aa12.37□□□□□ -0.43
USP8-215ENST00000560982 SLC35A3Q9Y2D2 325 aa12.37□□□□□ -0.43
USP8-215ENST00000560982 RAP2CQ9Y3L5 183 aa12.37□□□□□ -0.43
USP8-215ENST00000560982 WDR45Q9Y484 360 aa12.37□□□□□ -0.43
USP8-215ENST00000560982 HIVEP2P31629 2446 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 A0A1W2PP18 115 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 DPRXA6NFQ7 191 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 SULT2B1O00204 365 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 BIRC5O15392 142 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 GUSBP08236 651 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 TFPIP10646 304 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 PGM1P36871 562 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 CDKN1AP38936 164 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 PHC1P78364 1004 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 FUT5Q11128 374 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 VEZF1Q14119 521 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 PPA1Q15181 289 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 CLEC12BQ2HXU8 276 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 WDR93Q6P2C0 686 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 FAM71CQ8NEG0 241 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 ZNF563Q8TA94 476 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 OIT3Q8WWZ8 545 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 TESCQ96BS2 214 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 ROPN1LQ96C74 230 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 C20orf27Q9GZN8 174 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 POLE3Q9NRF9 147 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 EMC3Q9P0I2 261 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 LIPT1Q9Y234 373 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.36□□□□□ -0.43
USP8-215ENST00000560982 MAGED1Q9Y5V3 778 aaPredicted RBP12.36□□□□□ -0.43
USP8-215ENST00000560982 SPIN1Q9Y657 262 aaPredicted RBP12.36□□□□□ -0.43
USP8-215ENST00000560982 JMJD1CQ15652 2540 aa12.36□□□□□ -0.43
USP8-215ENST00000560982 DNHD1Q96M86 4753 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 RGS16O15492 202 aaPredicted RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 BCAS1O75363 584 aaPredicted RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 SNUPNO95149 360 aaKnown RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 GGT1P19440 569 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 COX5AP20674 150 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 IGHV1-2P23083 117 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 RYKP34925 604 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 CHI3L1P36222 383 aaPredicted RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 APOBEC1P41238 236 aaKnown RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 SLC1A6P48664 564 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 KHKP50053 298 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 RPL14P50914 215 aaKnown RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 CLNS1AP54105 237 aaKnown RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 HPCAP84074 193 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 ETFDHQ16134 617 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 SPANXN4Q5MJ08 99 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 TIMM23BQ5SRD1 257 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 SAXO2Q658L1 398 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 ABLIM2Q6H8Q1 611 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 FRRS1Q6ZNA5 592 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 HMGN2P46Q86SG4 172 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 MTDHQ86UE4 582 aaKnown RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 MUCL1Q96DR8 90 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 ZHX1-C8orf76Q96EF9 292 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 NEURL3Q96EH8 262 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 DNAJA3Q96EY1 480 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 SORT1Q99523 831 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 CCDC106Q9BWC9 280 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 TRIM2Q9C040 744 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 SAP130Q9H0E3 1048 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 CTPS2Q9NRF8 586 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 MARCOQ9UEW3 520 aaPredicted RBP12.35□□□□□ -0.43
USP8-215ENST00000560982 CHRNA9Q9UGM1 479 aa12.35□□□□□ -0.43
USP8-215ENST00000560982 IGKV3D-15A0A087WSY6 115 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 KIAA1324LA8MWY0 1029 aaPredicted RBP12.34□□□□□ -0.43
USP8-215ENST00000560982 RNF223E7ERA6 249 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 ANKRD28O15084 1053 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 TM9SF1O15321 606 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 RAMP1O60894 148 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 LBPP18428 481 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 IDUAP35475 653 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 FAPQ12884 760 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 CASP8Q14790 479 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 PDK3Q15120 406 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 DPY19L1Q2PZI1 675 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 PGGHGQ32M88 737 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 FAM174BQ3ZCQ3 159 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 GPAT3Q53EU6 434 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 DNAJC14Q6Y2X3 702 aaPredicted RBP12.34□□□□□ -0.43
USP8-215ENST00000560982 SSX8Q7RTT4 187 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 GRINAQ7Z429 371 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 P2RY8Q86VZ1 359 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 KIRREL3Q8IZU9 778 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 UBE2J2Q8N2K1 259 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 MREGQ8N565 214 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 ARFGAP2Q8N6H7 521 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 ZNF433Q8N7K0 673 aaPredicted RBP12.34□□□□□ -0.43
USP8-215ENST00000560982 MAPK1IP1LQ8NDC0 245 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 ZG16BQ96DA0 208 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 SLC35A5Q9BS91 424 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 NUF2Q9BZD4 464 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 ALG2Q9H553 416 aa12.34□□□□□ -0.43
USP8-215ENST00000560982 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
USP8-215ENST00000560982 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.34□□□□□ -0.43
USP8-215ENST00000560982 CISD1Q9NZ45 108 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms