RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 BAIAP2L1Q9UHR4 511 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 PTGDR2Q9Y5Y4 395 aa9.23□□□□□ -0.93
CDC42BPB-207ENST00000560492 NUP214P35658 2090 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ZNF724A8MTY0 619 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 DYNC1I1O14576 645 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 CFLARO15519 480 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 TCF21O43680 179 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 MRPL33O75394 65 aaKnown RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 PGM3O95394 542 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 H6PDO95479 791 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 KRT16P08779 473 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 THBS2P35442 1172 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 SOAT1P35610 550 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 HPCAL1P37235 193 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 DIO1P49895 249 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ATP12AP54707 1039 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 SNRPD2P62316 118 aaKnown RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 MERTKQ12866 999 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 CASP12Q6UXS9 341 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 C12orf54Q6X4T0 127 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 SLC46A3Q7Z3Q1 461 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 TRIM46Q7Z4K8 759 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 LCA5Q86VQ0 697 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 OR5W2Q8NH69 310 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 HOXB13Q92826 284 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 MSI2Q96DH6 328 aaKnown RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 FAM120BQ96EK7 910 aaKnown RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 STACQ99469 402 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 CCT7Q99832 543 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 THUMPD3Q9BV44 507 aaKnown RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 FUT8Q9BYC5 575 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ACTRT3Q9BYD9 372 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 PIGUQ9H490 435 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 DUSP22Q9NRW4 184 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ACSS1Q9NUB1 689 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ARGLU1Q9NWB6 273 aaPredicted RBP9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 TAS2R16Q9NYV7 291 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 TBK1Q9UHD2 729 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ICAM5Q9UMF0 924 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 DTNAQ9Y4J8 743 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ACTL7BQ9Y614 415 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 SLC25A15Q9Y619 301 aa9.22□□□□□ -0.93
CDC42BPB-207ENST00000560492 ATP6V1G2-DDX39BF2Z307 99 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 H3BQF6 201 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 SKAP2O75563 359 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 CHEK2O96017 543 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 PGRP06401 933 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 UROSP10746 265 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 SDC1P18827 310 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 CDH2P19022 906 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 APOBEC3AP31941 199 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 NR4A2P43354 598 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 ASMTP46597 345 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 CCT3P49368 545 aaKnown RBP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 PHC1P78364 1004 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 GPR68Q15743 365 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 CR1LQ2VPA4 569 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 LINC01559Q495D7 138 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 KLHL26Q53HC5 615 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 PDZK1Q5T2W1 519 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR7E24Q6IFN5 339 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 FRMD7Q6ZUT3 714 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 R3HCC1LQ7Z5L2 792 aaKnown RBP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 RELL1Q8IUW5 271 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 DDIASQ8IXT1 998 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR56A1Q8NGH5 318 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF563Q8TA94 476 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 TMEM234Q8WY98 164 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 ING1Q9UK53 422 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 SPIN1Q9Y657 262 aaPredicted RBP9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 ARFGEF3Q5TH69 2177 aa9.21□□□□□ -0.94
CDC42BPB-207ENST00000560492 NDUFS8O00217 210 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 GPR171O14626 319 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 EIF4E2O60573 245 aaKnown RBP9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 GLRA3O75311 464 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 ERLIN1O75477 346 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 CSTAP01040 98 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 LINC00032P0C843 101 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 UBTFL6P0CB48 400 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 NEFHP12036 1026 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 PGCP20142 388 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 CCNA2P20248 432 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 MAGEA8P43361 318 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 SESN3P58005 492 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR2B6P58173 313 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 SYT14P1Q58G82 188 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 VHLLQ6RSH7 139 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZYG11AQ6WRX3 759 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 TIFABQ6ZNK6 161 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 TMPPEQ6ZT21 453 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 SPATA19Q7Z5L4 167 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 IFT20Q8IY31 132 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 ANKS4BQ8N8V4 417 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR7A2PQ8NGA2 310 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR52E4Q8NGH9 312 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 OR5AK3PQ8NH89 298 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 PIGXQ8TBF5 258 aa9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 SLC25A43Q8WUT9 341 aaPredicted RBP9.2□□□□□ -0.94
CDC42BPB-207ENST00000560492 ZNF75CPQ92670 426 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms