RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 AKAP10O43572 662 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 ATP6V1C1P21283 382 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 SLC16A1P53985 500 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 CSNK2A1P68400 391 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 CBFBQ13951 182 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 LASP1Q14847 261 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 DCST2Q5T1A1 773 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 CDC73Q6P1J9 531 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 ZNF540Q8NDQ6 660 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 TOR1AIP2Q8NFQ8 470 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 RFWD2Q8NHY2 731 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 CCT7Q99832 543 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 BHLHE41Q9C0J9 482 aaPredicted RBP17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 SLC17A5Q9NRA2 495 aa17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 ZCCHC3Q9NUD5 404 aaKnown RBP17.26■□□□□ 0.35
RABGGTA-214ENST00000560163 LRP5LA4QPB2 252 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 VENTXO95231 258 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 SDC1P18827 310 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 EFNA1P20827 205 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 IL2RGP31785 369 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 COMPP49747 757 aaPredicted RBP17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 SESN3P58005 492 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 SYT14P1Q58G82 188 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 C1QTNF12Q5T7M4 302 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 C17orf78Q8N4C9 275 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 ANKS4BQ8N8V4 417 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 OR52E4Q8NGH9 312 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 ZFAND2BQ8WV99 257 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 ST8SIA1Q92185 356 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 ARL8AQ96BM9 186 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 THUMPD3Q9BV44 507 aaKnown RBP17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 C1orf109Q9NX04 203 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 BAIAP2L1Q9UHR4 511 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 DCTN4Q9UJW0 460 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 MOKQ9UQ07 419 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 AMDHD2Q9Y303 409 aa17.25■□□□□ 0.35
RABGGTA-214ENST00000560163 GPR171O14626 319 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 MRPL33O75394 65 aaKnown RBP17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 TACSTD2P09758 323 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 GIFP27352 417 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 GCAP28676 217 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 SKP2Q13309 424 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 BHLHB9Q6PI77 547 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 ZNF572Q7Z3I7 529 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 CCNYL1Q8N7R7 359 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 C1orf162Q8NEQ5 155 aaPredicted RBP17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 SEMA6DQ8NFY4 1073 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 TSSK3Q96PN8 268 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 ACTRT3Q9BYD9 372 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 LAT2Q9GZY6 243 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 GPATCH2Q9NW75 528 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 PTGDR2Q9Y5Y4 395 aa17.24■□□□□ 0.35
RABGGTA-214ENST00000560163 A0A0A6YYJ9 748 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 SLCO1B7G3V0H7 640 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 H3BQF6 201 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 LILRA1O75019 489 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 STAMBPO95630 424 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 UBL4AP11441 157 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 SNRPD2P62316 118 aaKnown RBP17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 CARTPTQ16568 116 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 FRMD7Q6ZUT3 714 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 CCDC103Q8IW40 242 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 TMCO5AQ8N6Q1 288 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 OR2T11Q8NH01 316 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 PSMA8Q8TAA3 256 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 HPS1Q92902 700 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 MTERF3Q96E29 417 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 CHMP6Q96FZ7 201 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 BOD1Q96IK1 185 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 ARL5BQ96KC2 179 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 SERINC1Q9NRX5 453 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 KCNE5Q9UJ90 142 aa17.23■□□□□ 0.35
RABGGTA-214ENST00000560163 SERINC4A6NH21 518 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 G3V2L1 256 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 URI1O94763 535 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 SLU7O95391 586 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 PMS2P2O95744 297 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 UROSP10746 265 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 SERPINF1P36955 418 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 SRP14P37108 136 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 CCR4P51679 360 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 H3F3AP84243 136 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 MERTKQ12866 999 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 WHAMMP3Q1A5X7 153 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 RFTN2Q52LD8 501 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 PDZK1Q5T2W1 519 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 C9orf135Q5VTT2 229 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 DEF8Q6ZN54 512 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 ZNF614Q8N883 585 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 LINC01356Q8N9X3 169 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 CLHC1Q8NHS4 586 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 SGMS2Q8NHU3 365 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 PIGXQ8TBF5 258 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 ADAMTS15Q8TE58 950 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 SLC25A43Q8WUT9 341 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 SDF2Q99470 211 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 VRK1Q99986 396 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 CCDC106Q9BWC9 280 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 SLC7A10Q9NS82 523 aa17.22■□□□□ 0.35
RABGGTA-214ENST00000560163 ACER3Q9NUN7 267 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms