RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ACAA2P42765 397 aaKnown RBP16.33■□□□□ 0.21
SNX1-208ENST00000559844 SPHARQ15513 63 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 C19orf48Q6RUI8 117 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 PFN4Q8NHR9 129 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 FANK1Q8TC84 345 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 S100ZQ8WXG8 99 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 BPIFA2Q96DR5 249 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 RNFT2Q96EX2 444 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 SAMD8Q96LT4 415 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 LRFN5Q96NI6 719 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 DCSTAMPQ9H295 470 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 OR52D1Q9H346 318 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 PALMDQ9NP74 551 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 RPS6KB2Q9UBS0 482 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 OSGIN1Q9UJX0 560 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 SLC35A3Q9Y2D2 325 aa16.33■□□□□ 0.21
SNX1-208ENST00000559844 SERINC4A6NH21 518 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 DXOO77932 396 aaKnown RBP16.33■□□□□ 0.2
SNX1-208ENST00000559844 DLGAP3O95886 979 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 MAKP20794 623 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 PPICP45877 212 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 MTNR1AP48039 350 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 BMXP51813 675 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 DCDP81605 110 aaKnown RBP16.33■□□□□ 0.2
SNX1-208ENST00000559844 ELAVL1Q15717 326 aaKnown RBP16.33■□□□□ 0.2
SNX1-208ENST00000559844 ARHGAP40Q5TG30 622 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 ZNF385CQ66K41 422 aaPredicted RBP16.33■□□□□ 0.2
SNX1-208ENST00000559844 GRHL3Q8TE85 626 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 ART5Q96L15 291 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 HHATLQ9HCP6 504 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 FLRT3Q9NZU0 649 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 MRTO4Q9UKD2 239 aaKnown RBP16.33■□□□□ 0.2
SNX1-208ENST00000559844 EXOSC1Q9Y3B2 195 aaKnown RBP16.33■□□□□ 0.2
SNX1-208ENST00000559844 MSRB2Q9Y3D2 182 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 CLCA3PQ9Y6N3 262 aa16.33■□□□□ 0.2
SNX1-208ENST00000559844 MLLT10P55197 1068 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 SLC37A1P57057 533 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 NNATQ16517 81 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 NKAIN1Q4KMZ8 207 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 ALG10BQ5I7T1 473 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 NXNL2Q5VZ03 156 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 ULK3Q6PHR2 472 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 C6orf15Q6UXA7 325 aaPredicted RBP16.32■□□□□ 0.2
SNX1-208ENST00000559844 SLC43A2Q8N370 569 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 ZNF527Q8NB42 609 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 MR1Q95460 341 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 OPALINQ96PE5 141 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 TAPBPLQ9BX59 468 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 SPRY4Q9C004 299 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 UBQLN3Q9H347 655 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 FN3KQ9H479 309 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 AKIRIN1Q9H9L7 192 aaPredicted RBP16.32■□□□□ 0.2
SNX1-208ENST00000559844 H2AFY2Q9P0M6 372 aaPredicted RBP16.32■□□□□ 0.2
SNX1-208ENST00000559844 GPR52Q9Y2T5 361 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 CACNA1AO00555 2505 aa16.32■□□□□ 0.2
SNX1-208ENST00000559844 STMND1H3BQB6 276 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 CSTAP01040 98 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 CDH11P55287 796 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 DCAF7P61962 342 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 MLLT11Q13015 90 aaPredicted RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 ZNF846Q147U1 533 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 AADACL4Q5VUY2 407 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 LCN10Q6JVE6 187 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 TIPARPQ7Z3E1 657 aaKnown RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 OR9Q1Q8NGQ5 310 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 ZNF426Q9BUY5 554 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 HMG20AQ9NP66 347 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 MKKSQ9NPJ1 570 aaPredicted RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 C20orf141Q9NUB4 165 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 CLEC2DQ9UHP7 191 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 TCRBV16S1A1N1A0A5B0 115 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 FRG2CA6NGY1 282 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 KPNA4O00629 521 aaPredicted RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 HCN1O60741 890 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 IL33O95760 270 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 CH25HO95992 272 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 ENDOUP21128 410 aaKnown RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 ADH7P40394 386 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 GPR143P51810 404 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 GAS1P54826 345 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 FAM199XQ6PEV8 388 aaPredicted RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 SMARCD3Q6STE5 483 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 HSDL2Q6YN16 418 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 SLC2A12Q8TD20 617 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 TSLPQ969D9 159 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 SH3YL1Q96HL8 342 aaPredicted RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 WDR12Q9GZL7 423 aaKnown RBP16.31■□□□□ 0.2
SNX1-208ENST00000559844 OR51E2Q9H255 320 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 ATP13A2Q9NQ11 1180 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 UBQLN4Q9NRR5 601 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 SLC22A11Q9NSA0 550 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 BAIAP2Q9UQB8 552 aa16.31■□□□□ 0.2
SNX1-208ENST00000559844 NUP210LQ5VU65 1888 aa16.3■□□□□ 0.2
SNX1-208ENST00000559844 CLDN25C9JDP6 229 aa16.3■□□□□ 0.2
SNX1-208ENST00000559844 ZGLP1P0C6A0 271 aa16.3■□□□□ 0.2
SNX1-208ENST00000559844 SAGP10523 405 aaPredicted RBP16.3■□□□□ 0.2
SNX1-208ENST00000559844 CD82P27701 267 aa16.3■□□□□ 0.2
SNX1-208ENST00000559844 LCN1P31025 176 aa16.3■□□□□ 0.2
SNX1-208ENST00000559844 KLHL26Q53HC5 615 aa16.3■□□□□ 0.2
SNX1-208ENST00000559844 GDPGP1Q6ZNW5 385 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms