RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ADAM8P78325 824 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 POU6F2P78424 691 aaPredicted RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 SLC25A3Q00325 362 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 SLC18A2Q05940 514 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 PTGR1Q14914 329 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 KIAA0040Q15053 153 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 BCL2A1Q16548 175 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 NDUFAF6Q330K2 333 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 MFSD12Q6NUT3 480 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 CDC73Q6P1J9 531 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 ZNF474Q6S9Z5 364 aaPredicted RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 LRIG3Q6UXM1 1119 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 R3HCC1LQ7Z5L2 792 aaKnown RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 TDRPQ86YL5 185 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 P3H2Q8IVL5 708 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 KRTCAP2Q8N6L1 136 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 TMCO5AQ8N6Q1 288 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 BANPQ8N9N5 519 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 FNDC5Q8NAU1 212 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 OR10D3Q8NH80 312 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 PHOSPHO1Q8TCT1 267 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 TCP10LQ8TDR4 215 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 RNF138Q8WVD3 245 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 TUBGCP3Q96CW5 907 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 ARSGQ96EG1 525 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 PKNOX2Q96KN3 472 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 SMR3AQ99954 134 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 CXXC4Q9H2H0 198 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 CENPHQ9H3R5 247 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 PLEKHF2Q9H8W4 249 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 PPCSQ9HAB8 311 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 EML4Q9HC35 981 aaKnown RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 ZNF226Q9NYT6 803 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 FAF1Q9UNN5 650 aaPredicted RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 COA3Q9Y2R0 106 aaPredicted RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 WBP11Q9Y2W2 641 aaKnown RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 MRPS18CQ9Y3D5 142 aaKnown RBP6.56□□□□□ -1.36
SPG11-213ENST00000558988 TRAF6Q9Y4K3 522 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 AP4B1Q9Y6B7 739 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 HIVEP1P15822 2718 aa6.56□□□□□ -1.36
SPG11-213ENST00000558988 C16orf97H3BN30 126 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 GTPBP1O00178 669 aaKnown RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 SCAMP2O15127 329 aaKnown RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 CTIFO43310 598 aaKnown RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 SMPD2O60906 423 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 LYPLA1O75608 230 aaPredicted RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 NKX2-2O95096 273 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 NTN1O95631 604 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 HSPA4LO95757 839 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 C6orf47O95873 294 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CRHP06850 196 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 FCGR2AP12318 317 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CREB1P16220 341 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 IL11P20809 199 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 PRPH2P23942 346 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 SHC1P29353 583 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 UGT2B10P36537 528 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 ASMTP46597 345 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CCT3P49368 545 aaKnown RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 VSNL1P62760 191 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 EEF1A1P68104 462 aaKnown RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 NKX6-1P78426 367 aaPredicted RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 FOXF1Q12946 379 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CD226Q15762 336 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 PDCD2Q16342 344 aaPredicted RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 PGS1Q32NB8 556 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 ATP6AP1LQ52LC2 224 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CPTPQ5TA50 214 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 EEF1A1P5Q5VTE0 462 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 IL23RQ5VWK5 629 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 HBMQ6B0K9 141 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 OLIG3Q7RTU3 272 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CAMKMTQ7Z624 323 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 TRABD2AQ86V40 505 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CNPY4Q8N129 248 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CLEC4FQ8N1N0 589 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 ZNF619Q8N2I2 560 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 B4GALNT2Q8NHY0 566 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 ROBO4Q8WZ75 1007 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 FAM120BQ96EK7 910 aaKnown RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 PERPQ96FX8 193 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 PPP3R2Q96LZ3 170 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 C3orf30Q96M34 536 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CCL19Q99731 98 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 TRMOQ9BU70 441 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 CXorf36Q9H7Y0 433 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 ANKZF1Q9H8Y5 726 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 RNF122Q9H9V4 155 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 ACSS1Q9NUB1 689 aaPredicted RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 MED17Q9NVC6 651 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 MCTS1Q9ULC4 181 aaKnown RBP6.55□□□□□ -1.36
SPG11-213ENST00000558988 ZNF175Q9Y473 711 aa6.55□□□□□ -1.36
SPG11-213ENST00000558988 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 A0A0J9YW62 118 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 TTC36A6NLP5 189 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ZAR1LA6NP61 321 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 DEFB108AA8MXU0 73 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 ALG1L2C9J202 215 aa6.54□□□□□ -1.36
SPG11-213ENST00000558988 DDX5P17844 614 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms