RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ST8SIA1Q92185 356 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 PMM1Q92871 262 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 MARVELD3Q96A59 401 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 LRRC58Q96CX6 371 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 RCN3Q96D15 328 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 WFDC6Q9BQY6 131 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 SPATA9Q9BWV2 254 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 PRRG4Q9BZD6 226 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 KAT8Q9H7Z6 458 aaKnown RBP12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 COQ10BQ9H8M1 238 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 CHST11Q9NPF2 352 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 EXOSC3Q9NQT5 275 aaKnown RBP12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 GMPR2Q9P2T1 348 aaKnown RBP12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 ZNF629Q9UEG4 869 aaPredicted RBP12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 ZNF232Q9UNY5 417 aa12.39□□□□□ -0.43
TSPAN3-205ENST00000558745 A0A1W2PNV4 684 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 CFAP73A6NFT4 308 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 SNX3O60493 162 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 TNFSF13O75888 250 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 OPN1SWP03999 348 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 TFPIP10646 304 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 COX4I1P13073 169 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 COX6B1P14854 86 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 ENPP1P22413 925 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 SLC6A2P23975 617 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 TACR3P29371 465 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 KIR2DL2P43627 348 aaPredicted RBP12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 SELENBP1Q13228 472 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 LARS2Q15031 903 aaKnown RBP12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 CYP51A1Q16850 503 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 TRMT5Q32P41 509 aaKnown RBP12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 SLC25A35Q3KQZ1 300 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 MEX3BQ6ZN04 569 aaKnown RBP12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 BTLAQ7Z6A9 289 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 ZZZ3Q8IYH5 903 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 CADM2Q8N3J6 435 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 OIT3Q8WWZ8 545 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 TMEM234Q8WY98 164 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 STARD4Q96DR4 205 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 OR5B2Q96R09 309 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 OR11A1Q9GZK7 315 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 ENKD1Q9H0I2 346 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 TMEM38AQ9H6F2 299 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 STOML1Q9UBI4 398 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 OSGIN1Q9UJX0 560 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 CORO2BQ9UQ03 480 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 ZFHX3Q15911 3703 aa12.38□□□□□ -0.43
TSPAN3-205ENST00000558745 TMEM72A0PK05 275 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 EEF1E1-BLOC1S5C9J1V9 151 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 M0QX08 132 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 AIM2O14862 343 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 EEF1E1O43324 174 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 CCDC22O60826 627 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 THBS1P07996 1170 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ELK4P28324 431 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ADSLP30566 484 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 UQCRC1P31930 480 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 OPRM1P35372 400 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 DMTNQ08495 405 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 BNIP2Q12982 314 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 MAPRE2Q15555 327 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 RNF220Q5VTB9 566 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 PRAMEF8Q5VWM4 474 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 PRAMEF7Q5VXH5 474 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 GRINAQ7Z429 371 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 SMYD1Q8NB12 490 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ARL5BQ96KC2 179 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 MYLK2Q9H1R3 596 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 OPN3Q9H1Y3 402 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 IFT52Q9Y366 437 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ZNF175Q9Y473 711 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 POLQO75417 2590 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 CSMD1Q96PZ7 3565 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 TMED7-TICAM2A0A0A6YYA0 188 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 CCT8L1PA6NM43 557 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 SYT5O00445 386 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 HNRNPRO43390 633 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 SMNDC1O75940 238 aaKnown RBP eCLIP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 SYNGR4O95473 234 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 IL18BPO95998 194 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ETS2P15036 469 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 APOBEC1P41238 236 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 PDSS1Q5T2R2 415 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 NET1Q7Z628 596 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 PIGWQ7Z7B1 504 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ZNF295-AS1Q8N0V1 137 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 HIPK4Q8NE63 616 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 RP9Q8TA86 221 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ABHD3Q8WU67 409 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ZNF775Q96BV0 537 aaPredicted RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ZNF583Q96ND8 569 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 SFXN3Q9BWM7 321 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 ADAM19Q9H013 955 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 SERINC1Q9NRX5 453 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 JKAMPQ9P055 326 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 CHRNA9Q9UGM1 479 aa12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 MCTS1Q9ULC4 181 aaKnown RBP12.37□□□□□ -0.43
TSPAN3-205ENST00000558745 TMED7Q9Y3B3 224 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms