RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FAM86C2PA6NEL3 165 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 SERINC4A6NH21 518 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 MCIDASD6RGH6 385 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 E9PI62 339 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 BCAT2O15382 392 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 ZNF749O43361 778 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 HSD17B7P56937 341 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ZNF45Q02386 682 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 FHL1Q13642 323 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 VASNQ6EMK4 673 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ZNF322Q6U7Q0 402 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 QSOX2Q6ZRP7 698 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 SPATC1Q76KD6 591 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 MARCH9Q86YJ5 346 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 CLDN22Q8N7P3 220 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ATP6V1C2Q8NEY4 427 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 OR5M3Q8NGP4 307 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 KCTD7Q96MP8 289 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ADOQ96SZ5 270 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 TIGARQ9NQ88 270 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 KLHL1Q9NR64 748 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 CMC2Q9NRP2 79 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 SACM1LQ9NTJ5 587 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 MED17Q9NVC6 651 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 C14orf105Q9NVL8 296 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 MALT1Q9UDY8 824 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 MUTYHQ9UIF7 546 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 ATXN7L1Q9ULK2 861 aaPredicted RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 EXOGQ9Y2C4 368 aaKnown RBP9.7□□□□□ -0.86
TPM1-210ENST00000558264 A3GALT2U3KPV4 340 aa9.7□□□□□ -0.86
TPM1-210ENST00000558264 DAPL1A0PJW8 107 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 IRGMA1A4Y4 181 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 RIIAD1A6NNX1 92 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 NPIPB9F8W1W9 429 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 CASKO14936 926 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 HCN1O60741 890 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 PTP4A3O75365 173 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 IGHA1P01876 353 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 HPGDP15428 266 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 GABRA5P31644 462 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TPBGQ13641 420 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZNF141Q15928 474 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TCTE1Q5JU00 501 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 LYPD4Q6UWN0 246 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 FAM98AQ8NCA5 519 aaKnown RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 FAM174AQ8TBP5 190 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 SLC25A46Q96AG3 418 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZMYND19Q96E35 227 aaPredicted RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 TEAD3Q99594 435 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 G6PC3Q9BUM1 346 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 KATNB1Q9BVA0 655 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 RTN4RQ9BZR6 473 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TRIM2Q9C040 744 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 PRO3102Q9H379 93 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 PLEKHB1Q9UF11 243 aaPredicted RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 TMEM5Q9Y2B1 443 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 IER3IP1Q9Y5U9 82 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ARID1BQ8NFD5 2236 aaPredicted RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 A0A1W2PQL4 384 aaPredicted RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 CCDC182A6NF36 153 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 FAM171A2A8MVW0 826 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 GABRPO00591 440 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 HIST1H1CP16403 213 aaKnown RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 NAA10P41227 235 aaPredicted RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 CTBP2P56545 445 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 SLC37A1P57057 533 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 STARD6P59095 220 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 PSPHP78330 225 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 HSD11B2P80365 405 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TAB1Q15750 504 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TBC1D25Q3MII6 688 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 FAM27D1Q5T7N8 215 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ULK3Q6PHR2 472 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 OGFOD3Q6PK18 319 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 GDPGP1Q6ZNW5 385 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 SSX6Q7RTT6 188 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 GID4Q8IVV7 300 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ACBD7Q8N6N7 88 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 C10orf53Q8N6V4 93 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZPLD1Q8TCW7 415 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TIMP4Q99727 224 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 SYNDIG1Q9H7V2 258 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 UCK1Q9HA47 277 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 CRNNQ9UBG3 495 aaPredicted RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 COMMD3Q9UBI1 195 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 GRIP1Q9Y3R0 1128 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 IGHV3-20A0A0C4DH32 117 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 J3QLW9 94 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 KHNYNO15037 678 aaKnown RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 AKAP8O43823 692 aaKnown RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZNF19P17023 458 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 AFF3P51826 1226 aaKnown RBP9.69□□□□□ -0.86
TPM1-210ENST00000558264 COPZ1P61923 177 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ZNF181Q2M3W8 571 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 ARL9Q6T311 187 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TMPRSS11AQ6ZMR5 421 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 LANCL3Q6ZV70 420 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 TMPRSS9Q7Z410 1059 aa9.69□□□□□ -0.86
TPM1-210ENST00000558264 GRAMD2AQ8IUY3 354 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms