RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 ZNF85Q03923 595 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 GPR139Q6DWJ6 353 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 FAAH2Q6GMR7 532 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 METAP1DQ6UB28 335 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 STPG2Q8N412 459 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 OR52L1Q8NGH7 329 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 NXPE2Q96DL1 559 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 RSPRY1Q96DX4 576 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 SFXN2Q96NB2 322 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 CD180Q99467 661 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 SLC6A17Q9H1V8 727 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 SLC6A20Q9NP91 592 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 MRPS30Q9NP92 439 aaKnown RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 ACSS1Q9NUB1 689 aaPredicted RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 MRPL39Q9NYK5 338 aaKnown RBP11.42□□□□□ -0.58
LDLR-205ENST00000557933 UBQLN2Q9UHD9 624 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 ASB4Q9Y574 426 aa11.42□□□□□ -0.58
LDLR-205ENST00000557933 A0A0G2JPF8 293 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 UNC119BA6NIH7 251 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 HNRNPCL3B7ZW38 293 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 ADAM11O75078 769 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 ACSM4P0C7M7 580 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 HNRNPCL4P0DMR1 293 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 EPCAMP16422 314 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 LCN1P31025 176 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 FRKP42685 505 aaPredicted RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 MTNR1BP49286 362 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 RAB14P61106 215 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 PRR5P85299 388 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 SLC25A30Q5SVS4 291 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 MRPL2Q5T653 305 aaKnown RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 APOOLQ6UXV4 268 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 ZNF782Q6ZMW2 699 aaPredicted RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 GRAMD2AQ8IUY3 354 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 CMTM4Q8IZR5 234 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 GALNT6Q8NCL4 622 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 OR52E2Q8NGJ4 325 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 OR52N1Q8NH53 320 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 ZPLD1Q8TCW7 415 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 CXorf40AQ8TE69 158 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 ZNF707Q96C28 371 aaPredicted RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 FOXN4Q96NZ1 517 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 TSSK2Q96PF2 358 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 SORCS2Q96PQ0 1159 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 C19orf43Q9BQ61 176 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 MENTQ9BUN1 341 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 TEX12Q9BXU0 123 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 PRDM7Q9NQW5 492 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 CLDND1Q9NY35 253 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 KCNE5Q9UJ90 142 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 ZNF443Q9Y2A4 671 aaPredicted RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 CA5BQ9Y2D0 317 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 SHOXO15266 292 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 MT-ND5P03915 603 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 FBXO45P0C2W1 286 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 CPMP14384 443 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 CEBPBP17676 345 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 POLR2CP19387 275 aaPredicted RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 HSF2Q03933 536 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 MBOAT2Q6ZWT7 520 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 FCRLAQ7L513 359 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 IL17RCQ8NAC3 791 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 MOSPD2Q8NHP6 518 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 SETD7Q8WTS6 366 aaKnown RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 CHFRQ96EP1 664 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 PGLYRP3Q96LB9 341 aa11.41□□□□□ -0.58
LDLR-205ENST00000557933 RANBP3Q9H6Z4 567 aaPredicted RBP11.41□□□□□ -0.58
LDLR-205ENST00000557933 KHDRBS3O75525 346 aaKnown RBP11.4□□□□□ -0.58
LDLR-205ENST00000557933 DRD2P14416 443 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 CXCL2P19875 107 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 RBMS1P29558 406 aaKnown RBP11.4□□□□□ -0.58
LDLR-205ENST00000557933 CDK3Q00526 305 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 GRM7Q14831 915 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 C2orf68Q2NKX9 166 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 KIAA1211LQ6NV74 962 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 ABHD17CQ6PCB6 329 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 FAM98AQ8NCA5 519 aaKnown RBP11.4□□□□□ -0.58
LDLR-205ENST00000557933 OR11G2Q8NGC1 345 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 GINS4Q9BRT9 223 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 DPEP2Q9H4A9 486 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 STARD5Q9NSY2 213 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 DPP7Q9UHL4 492 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 COPS3Q9UNS2 423 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 FXYD6-FXYD2A0A087WZ82 144 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 C7orf66A4D0T2 115 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 SLC9A3R1O14745 358 aaPredicted RBP11.4□□□□□ -0.58
LDLR-205ENST00000557933 DOK2O60496 412 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 SELENOFO60613 162 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 TRIM3O75382 744 aaPredicted RBP11.4□□□□□ -0.58
LDLR-205ENST00000557933 KDM4BO94953 1096 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 RASGRP1O95267 797 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 ZNF888P0CJ79 500 aaPredicted RBP11.4□□□□□ -0.58
LDLR-205ENST00000557933 ICAM2P13598 275 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 MPIP34949 423 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 P2RY2P41231 377 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 PRDX1Q06830 199 aaKnown RBP11.4□□□□□ -0.58
LDLR-205ENST00000557933 ANGPT1Q15389 498 aa11.4□□□□□ -0.58
LDLR-205ENST00000557933 PYHIN1Q6K0P9 492 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms