RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 MBD3L5A6NJ08 208 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 CCT8L1PA6NM43 557 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 C17orf51A8MQB3 221 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 H3BML4 177 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 GCM2O75603 506 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 IL18BPO95998 194 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 LDLRP01130 860 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 PNMTP11086 282 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 AQP1P29972 269 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 GSK3BP49841 420 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 RAC3P60763 192 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 CSNK2A1P68400 391 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 DMTNQ08495 405 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 FOXF1Q12946 379 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 TOMM34Q15785 309 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 NRF1Q16656 503 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 DUSP7Q16829 419 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 ULK3Q6PHR2 472 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 MBD3L2Q8NHZ7 208 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 CPNE4Q96A23 557 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 DDIT4LQ96D03 193 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 KLHL15Q96M94 604 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 POTEKPQ9BYX7 375 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 TRIM8Q9BZR9 551 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 PCDHAC1Q9H158 963 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 GORASP2Q9H8Y8 452 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 TMEM27Q9HBJ8 222 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 ALKBH4Q9NXW9 302 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 ADA2Q9NZK5 511 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 SELENONQ9NZV5 590 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 RPS6KB2Q9UBS0 482 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 ZNF629Q9UEG4 869 aaPredicted RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 RPS6KA6Q9UK32 745 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 MCTS1Q9ULC4 181 aaKnown RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 PRPF19Q9UMS4 504 aaKnown RBP12.33□□□□□ -0.44
SHMT2-234ENST00000557703 TRAPPC4Q9Y296 219 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 FAM215AQ9Y5M1 114 aa12.33□□□□□ -0.44
SHMT2-234ENST00000557703 CXCR6O00574 342 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 GMFGO60234 142 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 RCBTB2O95199 551 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 FESP07332 822 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 HOXB6P17509 224 aaKnown RBP12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CXCR1P25024 350 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 SLC7A1P30825 629 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CHRNB4P30926 498 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CEACAM8P31997 349 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-234ENST00000557703 IFNA8P32881 189 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CPOXP36551 454 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 STARP49675 285 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CARD18P57730 90 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 RGS8P57771 180 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-234ENST00000557703 BNIP2Q12982 314 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 SGCBQ16585 318 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 NDUFAF6Q330K2 333 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 SYT14P1Q58G82 188 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 DCST1Q5T197 706 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 RTL6Q6ICC9 239 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 ZNF613Q6PF04 617 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 C6orf89Q6UWU4 347 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 GGNQ86UU5 652 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 ADGRG3Q86Y34 549 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 SLC43A2Q8N370 569 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 OR2V1Q8NHB1 315 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 STK35Q8TDR2 534 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 TAMM41Q96BW9 452 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CCDC120Q96HB5 630 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 ADGRG7Q96K78 797 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CDRT15Q96T59 188 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 ARHGDIGQ99819 225 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 TUBA1CQ9BQE3 449 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 TACO1Q9BSH4 297 aaKnown RBP12.32□□□□□ -0.44
SHMT2-234ENST00000557703 PIF1Q9H611 641 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CLCF1Q9UBD9 225 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 CD300AQ9UGN4 299 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 MAGEL2Q9UJ55 1249 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 OSGIN1Q9UJX0 560 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 USP9YO00507 2555 aaPredicted RBP12.32□□□□□ -0.44
SHMT2-234ENST00000557703 TENM4Q6N022 2769 aa12.32□□□□□ -0.44
SHMT2-234ENST00000557703 NCOA6Q14686 2063 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 HTR3EA5X5Y0 456 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 SLC22A20A6NK97 555 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 CLCA1A8K7I4 914 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 EIF1AYO14602 144 aaKnown RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 AP3D1O14617 1153 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 TPST1O60507 370 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 EIF1BO60739 113 aaKnown RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 ADAM11O75078 769 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 SEMA7AO75326 666 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 BCAS1O75363 584 aaPredicted RBP12.31□□□□□ -0.44
SHMT2-234ENST00000557703 SYNGR4O95473 234 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 PMS2P2O95744 297 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 GKN3PP0CG01 181 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 T-ENOLP0DO92 83 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 GLI4P10075 376 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 THRBP10828 461 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 GGT1P19440 569 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 CD247P20963 164 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 TACR3P29371 465 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 CPA2P48052 419 aa12.31□□□□□ -0.44
SHMT2-234ENST00000557703 ZNF136P52737 540 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms