RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 TEX44Q53QW1 395 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 XKR7Q5GH72 579 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 DMRTC1Q5HYR2 192 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 LGSNQ5TDP6 509 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 PDPK2PQ6A1A2 396 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 TTC19Q6DKK2 380 aaPredicted RBP2.55□□□□□ -2
TRAV28-201ENST00000557548 ARMCX5Q6P1M9 558 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 TMEM107Q6UX40 140 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 H2BFWTQ7Z2G1 175 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 BIVMQ86UB2 503 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 TPRA1Q86W33 373 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 ERICH1Q86X53 443 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 CATSPER3Q86XQ3 398 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 CCDC65Q8IXS2 484 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 PNPLA6Q8IY17 1366 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 ZNF614Q8N883 585 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 C15orf54Q8N8G6 183 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 Q8NBF4 154 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 FAM83FQ8NEG4 500 aaPredicted RBP2.55□□□□□ -2
TRAV28-201ENST00000557548 BBS1Q8NFJ9 593 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 OR1L6Q8NGR2 347 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 OR9A4Q8NGU2 314 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 SPATA3Q8NHX4 192 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 FLVCR1-AS1Q8TAF5 88 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 DNAJA4Q8WW22 397 aaPredicted RBP2.55□□□□□ -2
TRAV28-201ENST00000557548 MYO3BQ8WXR4 1341 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 LRRC45Q96CN5 670 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 FBXO17Q96EF6 278 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 MSANTD3Q96H12 275 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 C12orf42Q96LP6 360 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 TECTBQ96PL2 329 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 FMO2Q99518 471 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 C11orf70Q9BRQ4 267 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 UQCC2Q9BRT2 126 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 NIPSNAP3BQ9BS92 247 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 CCDC28BQ9BUN5 200 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 TM2D1Q9BX74 207 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 RHBGQ9H310 441 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 AZI2Q9H6S1 392 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 ANKRA2Q9H9E1 313 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 POPDC2Q9HBU9 364 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 NEK6Q9HC98 313 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 LZTFL1Q9NQ48 299 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 BAZ1AQ9NRL2 1556 aaPredicted RBP2.55□□□□□ -2
TRAV28-201ENST00000557548 FAM120CQ9NX05 1096 aaKnown RBP2.55□□□□□ -2
TRAV28-201ENST00000557548 MTRF1LQ9UGC7 380 aaKnown RBP2.55□□□□□ -2
TRAV28-201ENST00000557548 SLC2A6Q9UGQ3 507 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 RNF24Q9Y225 148 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 CA5BQ9Y2D0 317 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 PPIAL4AQ9Y536 164 aa2.55□□□□□ -2
TRAV28-201ENST00000557548 MROH2BQ7Z745 1585 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 PHLPP2Q6ZVD8 1323 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 IGLV7-46A0A075B6I9 117 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 IGHV2-70DA0A0C4DH43 119 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 LOC100506127A0A0U1RQW1 187 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 A0A1B0GTH9 108 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 ERICH2A1L162 156 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 RPL37AP8A6NKH3 93 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 VSTM2BA6NLU5 285 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 IFITM10A6NMD0 228 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 RSPH10B2B2RC85 870 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 F8VZ95 297 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 K7ERQ8 282 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 CDH16O75309 829 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 CST1P01037 141 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 SERPINB2P05120 415 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 CRYGBP07316 175 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 SNRPCP09234 159 aaKnown RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 RSPH10BP0C881 870 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 OR8G3PP0DMU2 310 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 HPGDP15428 266 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 POLR2EP19388 210 aaKnown RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 IGFBP5P24593 272 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 LMO2P25791 158 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 CHMLP26374 656 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 GNA11P29992 359 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 CDH5P33151 784 aaPredicted RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 CD80P33681 288 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 STARP49675 285 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 RIPK4P57078 832 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 TPM4P67936 248 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 SARNPP82979 210 aaKnown RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 CDK16Q00536 496 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 VGLL4Q14135 290 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 DPYSL3Q14195 570 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 GK3PQ14409 553 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 SLC10A1Q14973 349 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 PPP1R3AQ16821 1122 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 C17orf58Q2M2W7 97 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 KLHL38Q2WGJ6 581 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 TRIM16LQ309B1 348 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 ALKBH6Q3KRA9 238 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 Q3ZCU0 254 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 SPANXN2Q5MJ10 180 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 OTUD3Q5T2D3 398 aaPredicted RBP2.54□□□□□ -2
TRAV28-201ENST00000557548 MEDAGQ5VYS4 303 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 EMBQ6PCB8 327 aa2.54□□□□□ -2
TRAV28-201ENST00000557548 FAM199XQ6PEV8 388 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms